School of Molecular Bioscience, University of Sydney, NSW 2006, Australia.
Trends Microbiol. 2016 Mar;24(3):209-223. doi: 10.1016/j.tim.2015.11.009. Epub 2015 Dec 17.
Strain-to-strain variations in bacterial biofilm formation, metabolism, motility, virulence, evolvability, DNA repair and resistance (to phage, antibiotics, or environmental stresses) each contribute to bacterial diversity. Microbiologists should be aware that all of these traits are subject to constraints imposed by trade-offs, so adaptations improving one trait may be at the cost of another. A deeper appreciation of trade-offs is thus crucial for assessing the mechanistic limits on important bacterial characteristics. Studies of the negative correlations between various traits have revealed three molecular mechanisms, namely, trade-offs involving resource allocation, design constraint, and information processing. This review further discusses why these trade-off mechanisms are important in the establishment of models capable of predicting bacterial competition, coexistence, and sources of diversity.
细菌生物膜形成、代谢、运动、毒力、可进化性、DNA 修复和耐药性(噬菌体、抗生素或环境压力)的菌株间差异均有助于细菌多样性的形成。微生物学家应该意识到,所有这些特性都受到权衡所施加的限制,因此改善一种特性的适应可能是以牺牲另一种特性为代价的。因此,更深入地了解权衡对于评估重要细菌特性的机械限制至关重要。对各种特性之间的负相关关系的研究揭示了三种分子机制,即涉及资源分配、设计约束和信息处理的权衡。这篇综述进一步讨论了为什么这些权衡机制对于建立能够预测细菌竞争、共存和多样性来源的模型很重要。