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松材线虫小热激蛋白基因家族的全基因组调查与特征分析

Genome-wide survey and characterization of the small heat shock protein gene family in Bursaphelenchus xylophilus.

作者信息

Wang Feng, Li Danlei, Chen Qiaoli, Ma Ling

机构信息

College of Forestry, Northeast Forestry University, Harbin 150040, China.

出版信息

Gene. 2016 Apr 1;579(2):153-61. doi: 10.1016/j.gene.2015.12.047. Epub 2015 Dec 23.

Abstract

Temperatures directly influence the distribution and intensity of pine wilt disease, which is caused by the pine wood nematode Bursaphelenchus xylophilus. Small heat shock proteins (sHSPs) are molecular chaperones that contribute to nematode survival during the stress response to high temperatures. Seven B. xylophilus sHSPs (Bx-sHSPs) were identified and studied in a whole-genome shotgun project. The replacement of aromatic amino acids with aliphatic amino acids in motifs was the most significant difference between Bx-sHSPs and Caenorhabditis elegans sHSPs (Ce-sHSPs). In Bx-sHSPs, two motifs showed consensus sequences similar to the known palindromic nGAAn sequence or variants of this sequence. A phylogenetic tree of Bx-sHSPs and corresponding Ce-sHSPs suggests the existence of a one-to-one orthologous relationship for all sHSPs. Gene evolution patterns corresponding to both purifying selection and positive selection were found in orthologous pairs of Ce-sHSPs and Bx-sHSPs. The upregulation of Bx-sHSPs in response to heat stress (30°C) suggests that these proteins play a role in thermoregulation.

摘要

温度直接影响由松材线虫(Bursaphelenchus xylophilus)引起的松树萎蔫病的分布和强度。小分子热激蛋白(sHSPs)是分子伴侣,有助于线虫在高温应激反应中存活。在一个全基因组鸟枪法测序项目中鉴定并研究了七种松材线虫sHSPs(Bx-sHSPs)。基序中芳香族氨基酸被脂肪族氨基酸取代是Bx-sHSPs与秀丽隐杆线虫sHSPs(Ce-sHSPs)之间最显著的差异。在Bx-sHSPs中,两个基序显示出与已知回文nGAAn序列或该序列变体相似的共有序列。Bx-sHSPs和相应Ce-sHSPs的系统发育树表明所有sHSPs都存在一对一的直系同源关系。在Ce-sHSPs和Bx-sHSPs的直系同源对中发现了对应于纯化选择和正选择的基因进化模式。Bx-sHSPs在热应激(30°C)下的上调表明这些蛋白质在体温调节中发挥作用。

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