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烟草环斑病毒卫星RNA自我催化切割所需的序列。

Sequences required for self-catalysed cleavage of the satellite RNA of tobacco ringspot virus.

作者信息

Haseloff J, Gerlach W L

机构信息

CSIRO Division of Plant Industry, Canberra, Australia.

出版信息

Gene. 1989 Oct 15;82(1):43-52. doi: 10.1016/0378-1119(89)90028-0.

DOI:10.1016/0378-1119(89)90028-0
PMID:2684775
Abstract

The satellite RNA of tobacco ringspot virus (sTobRV) undergoes self-catalysed cleavage during replication. A plasmid for in vitro expression of sTobRV has been constructed and used to obtain a library of mutagenized sTobRV sequences. Screening of these mutants has allowed precise definition of the sequences required for (+) and (-) strand cleavage. The sequences and RNA structures associated with cleavage of each strand differ markedly. Cleavage of the (+) strand requires those sequences flanking the site for cleavage to form a 'hammerhead' domain, similar to those found in other satellite and viroid RNA. In contrast, cleavage of the (-) strand requires only a small region of 12 nucleotides (nt) at the site of cleavage, and a sequence of 55 nt positioned elsewhere in the molecule. Comparison with a closely related satellite suggests that a novel RNA structure may be involved in (-) strand cleavage.

摘要

烟草环斑病毒的卫星RNA(sTobRV)在复制过程中会发生自我催化切割。已构建了一个用于体外表达sTobRV的质粒,并用于获得诱变的sTobRV序列文库。对这些突变体的筛选使得能够精确界定正链和负链切割所需的序列。与每条链切割相关的序列和RNA结构明显不同。正链切割需要切割位点两侧的那些序列形成一个“锤头”结构域,类似于在其他卫星RNA和类病毒RNA中发现的结构域。相比之下,负链切割仅需要切割位点处12个核苷酸(nt)的小区域以及位于分子其他位置的55 nt序列。与一种密切相关的卫星RNA比较表明,一种新的RNA结构可能参与负链切割。

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