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半胱天冬酶11统计数据及预测中心评估系统

CASP11 statistics and the prediction center evaluation system.

作者信息

Kryshtafovych Andriy, Monastyrskyy Bohdan, Fidelis Krzysztof

机构信息

Protein Structure Prediction Center, Genome and Biomedical Sciences Facilities, University of California, Davis, California, 95616.

出版信息

Proteins. 2016 Sep;84 Suppl 1(Suppl 1):15-9. doi: 10.1002/prot.25005. Epub 2016 Mar 9.

Abstract

We outline the role of the Protein Structure Prediction Center (predictioncenter.org) in conducting the CASP11 and CASP ROLL experiments, discuss the experiment statistics, and provide an overview of the present CASP infrastructure. The biggest changes compared to the previous CASPs are the implementation of the evaluation system incorporating practically all evaluation measures, statistical tests, and visualization tools historically used by the CASP assessors, the expansion of the infrastructure to incorporate new categories of contact-assisted and multimeric predictions, and the redesign of the assessors' web-workspace enabling assessments based on multiple measures for different group categories and target sets. Proteins 2016; 84(Suppl 1):15-19. © 2016 Wiley Periodicals, Inc.

摘要

我们概述了蛋白质结构预测中心(predictioncenter.org)在开展CASP11和CASP ROLL实验中的作用,讨论了实验统计数据,并对当前的CASP基础设施进行了概述。与之前的CASP相比,最大的变化包括:实施了包含几乎所有评估措施、统计测试和CASP评估人员历来使用的可视化工具的评估系统;扩展基础设施以纳入新的接触辅助预测和多聚体预测类别;重新设计评估人员的网络工作区,以便基于针对不同组类别和目标集的多种措施进行评估。《蛋白质》2016年;84(增刊1):15 - 19。© 2016威利期刊公司。

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