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分析中的适配体。

Aptamers in analytics.

作者信息

Ilgu Muslum, Nilsen-Hamilton Marit

机构信息

Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames IA 50011, USA.

出版信息

Analyst. 2016 Mar 7;141(5):1551-68. doi: 10.1039/c5an01824b.

Abstract

Nucleic acid aptamers are promising alternatives to antibodies in analytics. They are generally obtained through an iterative SELEX protocol that enriches a population of synthetic oligonucleotides to a subset that can recognize the chosen target molecule specifically and avidly. A wide range of targets is recognized by aptamers. Once identified and optimized for performance, aptamers can be reproducibly synthesized and offer other key features, like small size, low cost, sensitivity, specificity, rapid response, stability, and reusability. This makes them excellent options for sensory units in a variety of analytical platforms including those with electrochemical, optical, and mass sensitive transduction detection. Many novel sensing strategies have been developed by rational design to take advantage of the tendency of aptamers to undergo conformational changes upon target/analyte binding and employing the principles of base complementarity that can drive the nucleic acid structure. Despite their many advantages over antibodies, surprisingly few aptamers have yet been integrated into commercially available analytical devices. In this review, we discuss how to select and engineer aptamers for their identified application(s), some of the challenges faced in developing aptamers for analytics and many examples of their reported successful performance as sensors in a variety of analytical platforms.

摘要

核酸适体在分析领域是有望替代抗体的选择。它们通常通过迭代的SELEX方案获得,该方案将合成寡核苷酸群体富集到一个能够特异性且高亲和力识别所选靶分子的亚群。适体可识别广泛的靶标。一旦识别并针对性能进行优化,适体就能被可重复地合成,并具有其他关键特性,如尺寸小、成本低、灵敏度高、特异性强、响应迅速、稳定性好和可重复使用性。这使其成为各种分析平台中传感单元的理想选择,包括那些具有电化学、光学和质量敏感转导检测功能的平台。通过合理设计,利用适体在与靶标/分析物结合时发生构象变化的趋势,并运用可驱动核酸结构的碱基互补原理,已开发出许多新颖的传感策略。尽管与抗体相比有诸多优势,但令人惊讶的是,很少有适体被集成到商用分析设备中。在本综述中,我们讨论了如何为已确定的应用选择和设计适体,开发用于分析的适体所面临的一些挑战,以及它们在各种分析平台中作为传感器的许多已报道成功性能的实例。

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