Wang Xuning, Zhang Yue, Huang Liang, Zhang Jiajin, Pan Fei, Li Bing, Yan Yongfeng, Jia Baoqing, Liu Hongyi, Li Shiyou, Zheng Wei
Department of Surgical Oncology, Chinese PLA General Hospital Beijing, China.
Beijing Institute of Genomics, Chinese Academy of Sciences Beijing, China.
Int J Clin Exp Pathol. 2015 Dec 1;8(12):16020-5. eCollection 2015.
Circular RNA (circRNA) is a type of RNAs which, unlike the better known linear RNA, forms a covalently closed continuous loop. They have emerged recently as a new player in governing fundamental biological processes. However it remains elusive about the correlation of hsa_circ_001988 abundance with colorectal cancer. To investigate the circular RNA expression in colorectal cancer, the targeted hsa_circ_001988 was selected from next generation sequence data base generated in house and then designed divergent primers to amplify hsa_circ_001988 and sequenced it for validation. The expression of hsa_circ_001988 in 31 matched colorectal cancer tissue and normal colon mucosa was analyzed by quantitative real-time polymerase chain reaction (qRT-PCR). We used ΔCt method and investigated the differences between tumor tissues and normal colon mucosa by paired t-test. One-way analysis of variance was conducted to analyze the relationship between hsa_circ_001988 expression level and clinic pathological factors of patients. Receiver operating characteristic (ROC) curve was built by SPSS to evaluate the diagnostic values. The expression of hsa_circ_001988 was significantly correlated with differentiation (P<0.05) and perineural invasion (P<0.05). The area under ROC curve of hsa_circ_001988 was 0.788 (P<0.05). Those results indicate that hsa_circ_001988 may become a novel potential biomarker in the diagnosis of colorectal cancer and a potential novel target for the treatment of colorectal cancer.
环状RNA(circRNA)是一种RNA,与更为人熟知的线性RNA不同,它形成共价闭合的连续环。它们最近作为调控基本生物学过程的新成员出现。然而,hsa_circ_001988丰度与结直肠癌的相关性仍不清楚。为了研究结直肠癌中的环状RNA表达,从内部生成的下一代序列数据库中选择目标hsa_circ_001988,然后设计发散引物扩增hsa_circ_001988并对其进行测序验证。通过定量实时聚合酶链反应(qRT-PCR)分析hsa_circ_001988在31对匹配的结直肠癌组织和正常结肠黏膜中的表达。我们采用ΔCt法,通过配对t检验研究肿瘤组织与正常结肠黏膜之间的差异。进行单因素方差分析以分析hsa_circ_001988表达水平与患者临床病理因素之间的关系。使用SPSS构建受试者工作特征(ROC)曲线以评估诊断价值。hsa_circ_001988的表达与分化(P<0.05)和神经周围浸润(P<0.05)显著相关。hsa_circ_001988的ROC曲线下面积为0.788(P<0.05)。这些结果表明,hsa_circ_001988可能成为结直肠癌诊断中的一种新型潜在生物标志物以及结直肠癌治疗的潜在新靶点。