Dong Yating, Li Cong, Zhang Yi, He Qiuling, Daud Muhammad K, Chen Jinhong, Zhu Shuijin
Department of Agronomy, Zhejiang University Hangzhou, China.
Department of Biotechnology and Genetic Engineering, Kohat University of Science and Technology Kohat, Pakistan.
Front Plant Sci. 2016 Feb 12;7:139. doi: 10.3389/fpls.2016.00139. eCollection 2016.
Glutathione S-transferases (GSTs) play versatile functions in multiple aspects of plant growth and development. A comprehensive genome-wide survey of this gene family in the genomes of G. raimondii and G. arboreum was carried out in this study. Based on phylogenetic analyses, the GST gene family of both two diploid cotton species could be divided into eight classes, and approximately all the GST genes within the same subfamily shared similar gene structure. Additionally, the gene structures between the orthologs were highly conserved. The chromosomal localization analyses revealed that GST genes were unevenly distributed across the genome in both G. raimondii and G. arboreum. Tandem duplication could be the major driver for the expansion of GST gene families. Meanwhile, the expression analysis for the selected 40 GST genes showed that they exhibited tissue-specific expression patterns and their expression were induced or repressed by salt stress. Those findings shed lights on the function and evolution of the GST gene family in Gossypium species.
谷胱甘肽S-转移酶(GSTs)在植物生长发育的多个方面发挥着多种功能。本研究对雷蒙德氏棉(G. raimondii)和亚洲棉(G. arboreum)基因组中的该基因家族进行了全面的全基因组调查。基于系统发育分析,这两个二倍体棉花物种的GST基因家族可分为八类,并且同一亚科内的几乎所有GST基因都具有相似的基因结构。此外,直系同源基因之间的基因结构高度保守。染色体定位分析表明,GST基因在雷蒙德氏棉和亚洲棉的基因组中分布不均。串联重复可能是GST基因家族扩张的主要驱动力。同时,对选定的40个GST基因的表达分析表明,它们呈现出组织特异性表达模式,并且其表达受到盐胁迫的诱导或抑制。这些发现为棉属物种中GST基因家族的功能和进化提供了线索。