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通过多重巢式聚合酶链反应检测多房棘球绦虫:在无金标准情况下对诊断敏感性和特异性的评估

Detection of Echinococcus multilocularis by MC-PCR: evaluation of diagnostic sensitivity and specificity without gold standard.

作者信息

Wahlström Helene, Comin Arianna, Isaksson Mats, Deplazes Peter

机构信息

Department of Disease Control and Epidemiology, National Veterinary Institute, Uppsala, Sweden;

Department of Disease Control and Epidemiology, National Veterinary Institute, Uppsala, Sweden.

出版信息

Infect Ecol Epidemiol. 2016 Mar 9;6:30173. doi: 10.3402/iee.v6.30173. eCollection 2016.

Abstract

INTRODUCTION

A semi-automated magnetic capture probe-based DNA extraction and real-time PCR method (MC-PCR), allowing for a more efficient large-scale surveillance of Echinococcus multilocularis occurrence, has been developed. The test sensitivity has previously been evaluated using the sedimentation and counting technique (SCT) as a gold standard. However, as the sensitivity of the SCT is not 1, test characteristics of the MC-PCR was also evaluated using latent class analysis, a methodology not requiring a gold standard.

MATERIALS AND METHODS

Test results, MC-PCR and SCT, from a previous evaluation of the MC-PCR using 177 foxes shot in the spring (n=108) and autumn 2012 (n=69) in high prevalence areas in Switzerland were used. Latent class analysis was used to estimate the test characteristics of the MC-PCR. Although it is not the primary aim of this study, estimates of the test characteristics of the SCT were also obtained.

RESULTS AND DISCUSSION

This study showed that the sensitivity of the MC-PCR was 0.88 [95% posterior credible interval (PCI) 0.80-0.93], which was not significantly different than the SCT, 0.83 (95% PCI 0.76-0.88), which is currently considered as the gold standard. The specificity of both tests was high, 0.98 (95% PCI 0.94-0.99) for the MC-PCR and 0.99 (95% PCI 0.99-1) for the SCT. In a previous study, using fox scats from a low prevalence area, the specificity of the MC-PCR was higher, 0.999% (95% PCI 0.997-1). One reason for the lower estimate of the specificity in this study could be that the MC-PCR detects DNA from infected but non-infectious rodents eaten by foxes. When using MC-PCR in low prevalence areas or areas free from the parasite, a positive result in the MC-PCR should be regarded as a true positive.

CONCLUSION

The sensitivity of the MC-PCR (0.88) was comparable to the sensitivity of SCT (0.83).

摘要

引言

已开发出一种基于半自动磁捕获探针的DNA提取和实时PCR方法(MC-PCR),可更有效地对多房棘球绦虫的发生情况进行大规模监测。此前已使用沉淀计数技术(SCT)作为金标准评估了该检测方法的灵敏度。然而,由于SCT的灵敏度并非1,因此还使用了潜在类别分析对MC-PCR的检测特性进行评估,该方法不需要金标准。

材料与方法

使用了之前在瑞士高流行地区对177只狐狸进行的MC-PCR评估结果,这些狐狸于2012年春季(n = 108)和秋季(n = 69)被射杀。采用潜在类别分析来估计MC-PCR的检测特性。尽管这并非本研究的主要目的,但也获得了SCT检测特性的估计值。

结果与讨论

本研究表明,MC-PCR的灵敏度为0.88 [95%后验可信区间(PCI)0.80 - 0.93],与目前被视为金标准的SCT的灵敏度0.83(95% PCI 0.76 - 0.88)无显著差异。两种检测方法的特异性都很高,MC-PCR为0.98(95% PCI 0.94 - 0.99),SCT为0.99(95% PCI 0.99 - 1)。在之前一项使用低流行地区狐狸粪便的研究中,MC-PCR的特异性更高,为0.999%(95% PCI 0.997 - 1)。本研究中特异性估计值较低的一个原因可能是MC-PCR检测到的是狐狸食用的受感染但无传染性的啮齿动物的DNA。在低流行地区或无该寄生虫的地区使用MC-PCR时,MC-PCR检测结果呈阳性应视为真阳性。

结论

MC-PCR的灵敏度(0.88)与SCT的灵敏度(0.83)相当。

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