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双链DNA通过固态纳米孔的转位频率。

Translocation frequency of double-stranded DNA through a solid-state nanopore.

作者信息

Bell Nicholas A W, Muthukumar Murugappan, Keyser Ulrich F

机构信息

Cavendish Laboratory, University of Cambridge, CB3 0HE, United Kingdom.

Polymer Science and Engineering Department, University of Massachusetts, Amherst, Massachusetts 01003, USA.

出版信息

Phys Rev E. 2016 Feb;93(2):022401. doi: 10.1103/PhysRevE.93.022401. Epub 2016 Feb 1.

Abstract

Solid-state nanopores are single-molecule sensors that measure changes in ionic current as charged polymers such as DNA pass through. Here, we present comprehensive experiments on the length, voltage, and salt dependence of the frequency of double-stranded DNA translocations through conical quartz nanopores with mean opening diameter 15 nm. We observe an entropic barrier-limited, length-dependent translocation frequency at 4M LiCl salt concentration and a drift-dominated, length-independent translocation frequency at 1M KCl salt concentration. These observations are described by a unifying convection-diffusion equation, which includes the contribution of an entropic barrier for polymer entry.

摘要

固态纳米孔是一种单分子传感器,可在诸如DNA等带电聚合物穿过时测量离子电流的变化。在此,我们展示了关于双链DNA通过平均开口直径为15nm的锥形石英纳米孔的转位频率对长度、电压和盐浓度依赖性的综合实验。我们观察到在4M LiCl盐浓度下,转位频率受熵垒限制且与长度有关;在1M KCl盐浓度下,转位频率以漂移为主且与长度无关。这些观察结果由一个统一的对流扩散方程描述,该方程包括聚合物进入时熵垒的贡献。

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