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基于集成式离心微流控装置的全自动比色法食源性致病菌检测

Fully automated and colorimetric foodborne pathogen detection on an integrated centrifugal microfluidic device.

机构信息

Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea.

出版信息

Lab Chip. 2016 May 21;16(10):1917-26. doi: 10.1039/c6lc00326e. Epub 2016 Apr 26.

DOI:10.1039/c6lc00326e
PMID:27112702
Abstract

This work describes fully automated and colorimetric foodborne pathogen detection on an integrated centrifugal microfluidic device, which is called a lab-on-a-disc. All the processes for molecular diagnostics including DNA extraction and purification, DNA amplification and amplicon detection were integrated on a single disc. Silica microbeads incorporated in the disc enabled extraction and purification of bacterial genomic DNA from bacteria-contaminated milk samples. We targeted four kinds of foodborne pathogens (Escherichia coli O157:H7, Salmonella typhimurium, Vibrio parahaemolyticus and Listeria monocytogenes) and performed loop-mediated isothermal amplification (LAMP) to amplify the specific genes of the targets. Colorimetric detection mediated by a metal indicator confirmed the results of the LAMP reactions with the colour change of the LAMP mixtures from purple to sky blue. The whole process was conducted in an automated manner using the lab-on-a-disc and a miniaturized rotary instrument equipped with three heating blocks. We demonstrated that a milk sample contaminated with foodborne pathogens can be automatically analysed on the centrifugal disc even at the 10 bacterial cell level in 65 min. The simplicity and portability of the proposed microdevice would provide an advanced platform for point-of-care diagnostics of foodborne pathogens, where prompt confirmation of food quality is needed.

摘要

本工作描述了在集成离心微流控装置(即盘上实验室)上全自动和比色法检测食源性病原体。所有分子诊断过程,包括 DNA 提取和纯化、DNA 扩增和扩增子检测,都集成在单个盘上。盘上的二氧化硅微珠能够从污染细菌的牛奶样品中提取和纯化细菌基因组 DNA。我们针对四种食源性病原体(大肠杆菌 O157:H7、鼠伤寒沙门氏菌、副溶血性弧菌和单核细胞增生李斯特菌)进行了环介导等温扩增(LAMP),以扩增目标物的特异性基因。金属指示剂介导的比色检测通过 LAMP 混合物从紫色变为天蓝色来确认 LAMP 反应的结果。整个过程使用盘上实验室和配备三个加热块的微型旋转仪器以自动化方式进行。我们证明了即使在 65 分钟内污染有食源性病原体的牛奶样品的细菌细胞数量低至 10 个时,也可以在离心盘上自动分析。该微器件的简单性和便携性将为食源性病原体的即时诊断提供一个先进的平台,在这种情况下需要快速确认食品质量。

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