Song Hye Seon, Cha In-Tae, Rhee Jin-Kyu, Yim Kyung June, Kim Ah Yoon, Choi Jong-Soon, Baek Su Jeong, Seo Myung-Ji, Park Soo-Je, Nam Young-Do, Roh Seong Woon
Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, South Korea.
Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, South Korea.
Int J Syst Evol Microbiol. 2016 Jul;66(7):2740-2746. doi: 10.1099/ijsem.0.001118. Epub 2016 Apr 26.
A novel halophilic archaeon designated strain CBA1114 was isolated from solar salt in the Republic of Korea. Strain CBA1114, cells of which were coccoid and Gram-stain-negative, grew in the presence of 15-30 % (w/v) NaCl (optimum, 20 %) and at 20-50 °C (optimum, 40 °C) and pH 7.0-9.0 (optimum, pH 8.0). Strain CBA1114 required Mg for growth. Strain CBA1114 had three 16S rRNA genes, rrnA, rrnB and rrnC; levels of similarity between the sequences were 99.7-99.9 %. The 16S rRNA gene sequence of strain CBA1114 showed 91.7 % similarity to that of Haloterrigena thermotolerans PR5. In multilocus sequence analysis (MLSA), five housekeeping genes, atpB, EF-2, radA, rpoB' and secY, were found to be closely related to those of the members of the genera Halorientalis(89.7 % similarity of the atpB gene sequence), Halomicroarcula(91.9 %, EF-2), Haloterrigena(85.4 %, radA), Natronoarchaeum(89.2 %, rpoB') and Natrinema(75.7 %, secY). A phylogenetic tree generated from the results of MLSA of the five housekeeping genes showed that strain CBA1114 was closely related to species of the genus Halorientalis in the family Halobacteriaceae. The major polar lipids were identified as phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and unidentified lipids. The G+C content of the genomic DNA of strain CBA1114 was 68.1 mol%. According to the results of phylogenetic, phenotypic and chemotaxonomic analyses, we designate strain CBA1114 (=JCM 30111=KCTC 4206) as the type strain of Halostella salina gen. nov., sp. nov., a novel species of a new genus within the family Halobacteriaceae.
从韩国的日晒盐中分离出了一株新的嗜盐古菌,命名为CBA1114菌株。CBA1114菌株的细胞呈球状,革兰氏染色阴性,在15%-30%(w/v)NaCl(最适浓度为20%)、20-50°C(最适温度为40°C)和pH 7.0-9.0(最适pH为8.0)的条件下生长。CBA1114菌株生长需要镁。CBA1114菌株有三个16S rRNA基因,即rrnA、rrnB和rrnC;序列之间的相似性水平为99.7%-99.9%。CBA1114菌株的16S rRNA基因序列与嗜热嗜盐栖菌PR5的序列相似性为91.7%。在多位点序列分析(MLSA)中,发现五个管家基因atpB、EF-2、radA、rpoB'和secY与东方盐栖菌属(atpB基因序列相似性为89.7%)、微小盐微古菌属(EF-2为91.9%)、嗜盐栖菌属(radA为85.4%)、嗜盐碱古菌属(rpoB'为89.2%)和盐线菌属(secY为75.7%)成员的管家基因密切相关。由这五个管家基因的MLSA结果生成的系统发育树表明,CBA1114菌株与盐杆菌科东方盐栖菌属的物种密切相关。主要极性脂类被鉴定为磷脂酰甘油、磷脂酰甘油磷酸甲酯和未鉴定的脂类。CBA1114菌株基因组DNA的G+C含量为68.1 mol%。根据系统发育、表型和化学分类分析结果,我们将CBA1114菌株(=JCM 30111=KCTC 4206)指定为盐栖新属盐栖盐菌新种的模式菌株,盐栖盐菌新属是盐杆菌科内的一个新属的新物种。