Song Hye Seon, Cha In-Tae, Yim Kyung June, Lee Hae-Won, Hyun Dong-Wook, Lee Sung-Jae, Rhee Sung-Keun, Kim Kil-Nam, Kim Daekyung, Choi Jong-Soon, Seo Myung-Ji, Choi Hak-Jong, Bae Jin-Woo, Rhee Jin-Kyu, Nam Young-Do, Roh Seong Woon
Korea Basic Science Institute, Daejeon, 305-806, Republic of Korea.
Antonie Van Leeuwenhoek. 2014 May;105(5):979-86. doi: 10.1007/s10482-014-0156-x. Epub 2014 Mar 28.
A halophilic archaeal strain, designated CBA1105(T), was isolated from non-purified solar salt. Strain CBA1105(T) was found to have three 16S rRNA genes, rrnA, rrnB and rrnC; similarities between the 16S rRNA gene sequences were 99.5-99.7 %. The phylogenetic analysis of the 16S rRNA gene sequences showed that strain CBA1105(T) forms a distinct clade with the strains of the closely related genera, Halorientalis and Halorhabdus, with similarities of 94.2 % and 93.9-94.2 %, respectively. Multilocus sequence analysis confirmed that strain CBA1105(T) is closely related to the genus Halorhabdus or Halorientalis. Growth of the strain was observed in 15-30 % NaCl (w/v; optimum 20 %), at 30-45 °C (optimum 37 °C) and pH 7.0-8.0 (optimum pH 7.0) and with 0-0.5 M MgCl2·6H2O (optimum 0.05-0.2 M). The cells of the strain were observed to be Gram-stain negative and pleomorphic with coccoid or ovoid-shape. The cells lysed in distilled water. Tweens 20, 40 and 80 were found to be hydrolysed but starch, casein and gelatine were not. The cells were unable to reduce nitrate under aerobic conditions. Assays for indole formation and urease activity were negative and no growth was observed under anaerobic conditions. Cells were found to be able to utilize L-glutamate, D-glucose, L-maltose, D-mannose and sucrose as sole carbon sources. The polar lipids were identified as phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester, unidentified glycolipids and an unidentified phospholipid. The G+C content of strain CBA1105(T) was determined to be 66.0 mol%. The phenotypic, chemotaxonomic and phylogenetic properties suggest that the strain represents a novel species of a novel genus within the family Halobacteriaceae, for which the name Halapricum salinum is proposed with CBA1105(T) (= KCTC 4202(T) = JCM 19729(T)) as the type strain.
从非纯化的日晒盐中分离出一株嗜盐古菌,命名为CBA1105(T)。发现菌株CBA1105(T)有三个16S rRNA基因,即rrnA、rrnB和rrnC;16S rRNA基因序列之间的相似性为99.5 - 99.7%。16S rRNA基因序列的系统发育分析表明,菌株CBA1105(T)与密切相关的属Halorientalis和Halorhabdus的菌株形成一个独特的分支,相似性分别为94.2%和93.9 - 94.2%。多位点序列分析证实菌株CBA1105(T)与Halorhabdus属或Halorientalis属密切相关。该菌株在15 - 30% NaCl(w/v;最适为20%)、30 - 45°C(最适37°C)和pH 7.0 - 8.0(最适pH 7.0)以及0 - 0.5 M MgCl₂·6H₂O(最适0.05 - 0.2 M)条件下可生长。观察到该菌株细胞革兰氏染色阴性,呈多形性,有球形或卵形。细胞在蒸馏水中会裂解。发现吐温20、40和80可被水解,但淀粉、酪蛋白和明胶不能被水解。细胞在有氧条件下不能还原硝酸盐。吲哚形成和脲酶活性检测为阴性,在厌氧条件下未观察到生长。发现细胞能够利用L - 谷氨酸、D - 葡萄糖、L - 麦芽糖、D - 甘露糖和蔗糖作为唯一碳源。极性脂类被鉴定为磷脂酰甘油、磷脂酰甘油磷酸甲酯、未鉴定的糖脂和一种未鉴定的磷脂。菌株CBA1105(T)的G + C含量测定为66.0 mol%。表型、化学分类和系统发育特性表明,该菌株代表嗜盐菌科内一个新属的一个新物种,为此提出名称Halapricum salinum,以CBA1105(T)(= KCTC 4202(T) = JCM 19729(T))作为模式菌株。