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通过竞争性寡核苷酸引发检测单个DNA碱基差异

Detection of single DNA base differences by competitive oligonucleotide priming.

作者信息

Gibbs R A, Nguyen P N, Caskey C T

机构信息

Institute for Molecular Genetics, Baylor College of Medicine, Houston, TX 77030.

出版信息

Nucleic Acids Res. 1989 Apr 11;17(7):2437-48. doi: 10.1093/nar/17.7.2437.

DOI:10.1093/nar/17.7.2437
PMID:2717399
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC317634/
Abstract

Synthetic DNA oligonucleotides can serve as efficient primers for DNA synthesis even when there is a single base mismatch between the primers and the corresponding DNA template. However, when the primer-template annealing is carried out with a mixture of primers and at low stringency the binding of a perfectly matched primer is strongly favored relative to a primer differing by a single base. This primer competition is observed over a range of oligonucleotide sizes from twelve to sixteen bases and with a variety of base mismatches. When coupled with the polymerase chain reaction, for the amplification of specific DNA sequences, competitive oligonucleotide priming provides a simple general strategy for the detection of single DNA base differences.

摘要

合成DNA寡核苷酸即使在引物与相应DNA模板之间存在单个碱基错配时,也可作为DNA合成的有效引物。然而,当用引物混合物在低严谨性条件下进行引物-模板退火时,与相差单个碱基的引物相比,完全匹配的引物的结合受到强烈偏好。在12至16个碱基的一系列寡核苷酸大小范围内以及各种碱基错配情况下,均观察到这种引物竞争现象。当与聚合酶链反应相结合用于特定DNA序列的扩增时,竞争性寡核苷酸引物引发为检测单个DNA碱基差异提供了一种简单通用的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/92329919b4fc/nar00124-0078-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/340011550ef4/nar00124-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/1044be8cb040/nar00124-0075-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/5d9d928a5bde/nar00124-0076-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/b21e5e4d7b7b/nar00124-0077-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/92329919b4fc/nar00124-0078-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/340011550ef4/nar00124-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/1044be8cb040/nar00124-0075-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/5d9d928a5bde/nar00124-0076-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/b21e5e4d7b7b/nar00124-0077-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c56b/317634/92329919b4fc/nar00124-0078-a.jpg

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