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迈向叶片衰老的系统理解:叶片衰老研究的综合多组学视角。

Toward Systems Understanding of Leaf Senescence: An Integrated Multi-Omics Perspective on Leaf Senescence Research.

机构信息

Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, 42988, Republic of Korea.

Department of New Biology, DGIST, Daegu, 42988, Republic of Korea.

出版信息

Mol Plant. 2016 Jun 6;9(6):813-25. doi: 10.1016/j.molp.2016.04.017. Epub 2016 May 10.

Abstract

Leaf senescence is a complex but tightly regulated developmental process involving a coordinated sequence of multiple molecular events, which ultimately leads to death of the leaf. Efforts to understand the mechanistic principles underlying leaf senescence have been largely made by transcriptomic, proteomic, and metabolomic studies over the past decade. This review focuses on recent milestones in leaf senescence research obtained using multi-omics technologies, as well as future endeavors toward systems understanding of leaf senescence processes. In particular, we discuss recent advances in understanding molecular events during leaf senescence through genome-wide transcriptome analyses in Arabidopsis. We also describe comparative transcriptome analyses used to unveil the commonality and diversity of regulatory mechanisms governing leaf senescence in the plant kingdom. Finally, we provide current illustrations of epigenomic, proteomic, and metabolomic landscapes of leaf senescence. We envisage that integration of multi-omics leaf senescence data will enable us to address unresolved questions regarding leaf senescence, including determining the molecular principles that coordinate concurrent and ordered changes in biological events during leaf senescence.

摘要

叶片衰老是一个复杂但受到严格调控的发育过程,涉及多个分子事件的协调序列,最终导致叶片死亡。在过去十年中,通过转录组学、蛋白质组学和代谢组学研究,人们努力理解叶片衰老的机制原理。本综述重点介绍了使用多组学技术在叶片衰老研究中取得的最新里程碑,以及对叶片衰老过程进行系统理解的未来努力。特别是,我们通过拟南芥全基因组转录组分析讨论了近年来在理解叶片衰老过程中的分子事件方面的进展。我们还描述了比较转录组分析,用于揭示调控植物界叶片衰老的共同和多样性的调控机制。最后,我们提供了叶片衰老的表观基因组学、蛋白质组学和代谢组学图谱的最新例证。我们设想,整合多组学叶片衰老数据将使我们能够解决与叶片衰老相关的未解决问题,包括确定协调叶片衰老过程中生物事件同时发生和有序变化的分子原理。

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