Correy Galen J, Carr Paul D, Meirelles Tamara, Mabbitt Peter D, Fraser Nicholas J, Weik Martin, Jackson Colin J
Research School of Chemistry, Australian National University, Canberra, ACT 0200, Australia.
Institut de Biologie Structurale Jean Pierre Ebel, Commisariat a l'Energie Atomique, Centre de National de la Recherche Scientifique, University Josef Fourier, 41 rue Jules Horowitz, 38027 Grenoble, France.
Structure. 2016 Jun 7;24(6):977-87. doi: 10.1016/j.str.2016.04.009. Epub 2016 May 19.
The proper function of enzymes often depends upon their efficient interconversion between particular conformational sub-states on a free-energy landscape. Experimentally characterizing these sub-states is challenging, which has limited our understanding of the role of protein dynamics in many enzymes. Here, we have used a combination of kinetic crystallography and detailed analysis of crystallographic protein ensembles to map the accessible conformational landscape of an insect carboxylesterase (LcαE7) as it traverses all steps in its catalytic cycle. LcαE7 is of special interest because of its evolving role in organophosphate insecticide resistance. Our results reveal that a dynamically coupled network of residues extends from the substrate-binding site to a surface loop. Interestingly, the coupling of this network that is apparent in the apoenzyme appears to be reduced in the phosphorylated enzyme intermediate. Altogether, the results of this work highlight the importance of protein dynamics to enzyme function and the evolution of new activity.
酶的正常功能通常取决于它们在自由能景观上特定构象亚态之间的有效相互转换。通过实验表征这些亚态具有挑战性,这限制了我们对蛋白质动力学在许多酶中作用的理解。在这里,我们结合了动力学晶体学和对晶体学蛋白质集合的详细分析,以绘制一种昆虫羧酸酯酶(LcαE7)在其催化循环的所有步骤中所经历的可及构象景观。LcαE7因其在有机磷杀虫剂抗性中不断演变的作用而特别受关注。我们的结果表明,一个动态耦合的残基网络从底物结合位点延伸到一个表面环。有趣的是,在脱辅基酶中明显的这个网络的耦合在磷酸化酶中间体中似乎减弱了。总之,这项工作的结果突出了蛋白质动力学对酶功能和新活性进化的重要性。