Vora Suhani, Tuttle Marcelle, Cheng Jenny, Church George
Wyss Institute for Biologically Inspired Design, Center for Life Sciences Boston, Boston, MA, USA.
Department of Genetics, Harvard Medical School, Boston, MA, USA.
FEBS J. 2016 Sep;283(17):3181-93. doi: 10.1111/febs.13768. Epub 2016 Jul 2.
Clustered regularly interspaced short palindromic repeats (CRISPRs) and CRISPR-associated (Cas) proteins offer a breakthrough platform for cheap, programmable, and effective sequence-specific DNA targeting. The CRISPR-Cas system is naturally equipped for targeted DNA cutting through its native nuclease activity. As such, groups researching a broad spectrum of biological organisms have quickly adopted the technology with groundbreaking applications to genomic sequence editing in over 20 different species. However, the biological code of life is not only encoded in genetics but also in epigenetics as well. While genetic sequence editing is a powerful ability, we must also be able to edit and regulate transcriptional and epigenetic code. Taking inspiration from work on earlier sequence-specific targeting technologies such as zinc fingers (ZFs) and transcription activator-like effectors (TALEs), researchers quickly expanded the CRISPR-Cas toolbox to include transcriptional activation, repression, and epigenetic modification. In this review, we highlight advances that extend the CRISPR-Cas toolkit for transcriptional and epigenetic regulation, as well as best practice guidelines for these tools, and a perspective on future applications.
成簇规律间隔短回文重复序列(CRISPRs)和CRISPR相关(Cas)蛋白为廉价、可编程且有效的序列特异性DNA靶向提供了一个突破性平台。CRISPR-Cas系统通过其天然核酸酶活性自然具备靶向切割DNA的能力。因此,研究广泛生物有机体的众多团队迅速采用了该技术,并在20多种不同物种的基因组序列编辑中取得了开创性应用。然而,生命的生物学密码不仅编码在遗传学中,也编码在表观遗传学中。虽然基因序列编辑是一项强大的能力,但我们还必须能够编辑和调控转录和表观遗传密码。受早期序列特异性靶向技术(如锌指蛋白(ZFs)和转录激活样效应因子(TALEs))研究工作的启发,研究人员迅速扩展了CRISPR-Cas工具库,使其包括转录激活、抑制和表观遗传修饰。在本综述中,我们重点介绍了扩展CRISPR-Cas工具库用于转录和表观遗传调控的进展、这些工具的最佳实践指南以及对未来应用的展望。