Nicolaou Nicoletta, Constandinou Timothy G
Department of Electrical and Electronic Engineering, Imperial College London London, UK.
Front Neuroinform. 2016 Jun 14;10:19. doi: 10.3389/fninf.2016.00019. eCollection 2016.
Causal prediction has become a popular tool for neuroscience applications, as it allows the study of relationships between different brain areas during rest, cognitive tasks or brain disorders. We propose a nonparametric approach for the estimation of nonlinear causal prediction for multivariate time series. In the proposed estimator, C NPMR , Autoregressive modeling is replaced by Nonparametric Multiplicative Regression (NPMR). NPMR quantifies interactions between a response variable (effect) and a set of predictor variables (cause); here, we modified NPMR for model prediction. We also demonstrate how a particular measure, the sensitivity Q, could be used to reveal the structure of the underlying causal relationships. We apply C NPMR on artificial data with known ground truth (5 datasets), as well as physiological data (2 datasets). C NPMR correctly identifies both linear and nonlinear causal connections that are present in the artificial data, as well as physiologically relevant connectivity in the real data, and does not seem to be affected by filtering. The Sensitivity measure also provides useful information about the latent connectivity.The proposed estimator addresses many of the limitations of linear Granger causality and other nonlinear causality estimators. C NPMR is compared with pairwise and conditional Granger causality (linear) and Kernel-Granger causality (nonlinear). The proposed estimator can be applied to pairwise or multivariate estimations without any modifications to the main method. Its nonpametric nature, its ability to capture nonlinear relationships and its robustness to filtering make it appealing for a number of applications.
因果预测已成为神经科学应用中的一种流行工具,因为它能够研究静息状态、认知任务或脑部疾病期间不同脑区之间的关系。我们提出了一种非参数方法来估计多元时间序列的非线性因果预测。在所提出的估计器C_NPMR中,自回归建模被非参数乘法回归(NPMR)所取代。NPMR量化了响应变量(效应)与一组预测变量(原因)之间的相互作用;在此,我们对NPMR进行了修改以用于模型预测。我们还展示了如何使用一种特定的度量——灵敏度Q来揭示潜在因果关系的结构。我们将C_NPMR应用于具有已知真实情况的人工数据(5个数据集)以及生理数据(2个数据集)。C_NPMR能够正确识别出人工数据中存在的线性和非线性因果联系,以及真实数据中与生理相关的连通性,并且似乎不受滤波的影响。灵敏度度量还提供了有关潜在连通性的有用信息。所提出的估计器解决了线性格兰杰因果关系和其他非线性因果关系估计器的许多局限性。将C_NPMR与成对和条件格兰杰因果关系(线性)以及核格兰杰因果关系(非线性)进行了比较。所提出的估计器可以应用于成对或多元估计,而无需对主要方法进行任何修改。其非参数性质、捕捉非线性关系的能力以及对滤波的鲁棒性使其在许多应用中颇具吸引力。