Chirasani Venkat R, Revanasiddappa Prasanna D, Senapati Sanjib
From the Bhupat and Jyoti Mehta School of Biosciences and Department of Biotechnology, Indian Institute of Technology Madras, Chennai 600036, India.
From the Bhupat and Jyoti Mehta School of Biosciences and Department of Biotechnology, Indian Institute of Technology Madras, Chennai 600036, India
J Biol Chem. 2016 Sep 9;291(37):19462-73. doi: 10.1074/jbc.M116.744623. Epub 2016 Jul 20.
Cholesteryl ester transfer protein (CETP) mediates the transfer of cholesteryl esters (CEs) and triglycerides between different lipoproteins. Recent studies have shown that blocking the function of CETP can increase the level of HDL cholesterol in blood plasma and suppress the risk of cardiovascular disease. Hence, understanding the structure, dynamics, and mechanism by which CETP transfers the neutral lipids has received tremendous attention in last decade. Although the recent crystal structure has provided direct evidence of the existence of strongly bound CEs in the CETP core, very little is known about the mechanism of CE/triglyceride transfer by CETP. In this study, we explore the large scale dynamics of CETP by means of multimicrosecond molecular dynamics simulations and normal mode analysis, which provided a wealth of detailed information about the lipid transfer mechanism of CETP. Results show that the bound CEs intraconvert between bent and linear conformations in the CETP core tunnel as a consequence of the high degree of conformational flexibility of the protein. During the conformational switching, there occurred a significant reduction in hydrophobic contacts between the CEs and CETP, and a continuous tunnel traversing across the CETP long axis appeared spontaneously. Thus, our results support the recently proposed "tunnel mechanism" of CETP from cryo-EM studies for the transfer of neutral lipids between different lipoproteins. The detailed understanding obtained here could help in devising methods to prevent CETP function as a cardiovascular disease therapeutic.
胆固醇酯转移蛋白(CETP)介导不同脂蛋白之间胆固醇酯(CEs)和甘油三酯的转移。最近的研究表明,阻断CETP的功能可以提高血浆中高密度脂蛋白胆固醇的水平,并降低心血管疾病的风险。因此,在过去十年中,了解CETP转移中性脂质的结构、动力学和机制受到了极大的关注。尽管最近的晶体结构提供了CETP核心中存在强结合CEs的直接证据,但对于CETP介导的CE/甘油三酯转移机制知之甚少。在本研究中,我们通过多微秒分子动力学模拟和正常模式分析探索了CETP的大规模动力学,这为CETP的脂质转移机制提供了丰富的详细信息。结果表明,由于蛋白质的高度构象灵活性,结合的CEs在CETP核心通道内的弯曲构象和线性构象之间相互转换。在构象转换过程中,CEs与CETP之间的疏水接触显著减少,并且自发出现了一条贯穿CETP长轴的连续通道。因此,我们的结果支持了最近从低温电子显微镜研究中提出的CETP在不同脂蛋白之间转移中性脂质的“通道机制”。这里获得的详细理解有助于设计预防CETP功能的方法以作为心血管疾病的治疗手段。