Hong Yi, Wu Guoying, Li Wei, Liu Dahai, He Kan
Center for Stem Cell and Translational Medicine, School of Life Sciences, Anhui University, Hefei City, Anhui 230601, P. R. China.
Department of Biostatistics, School of Life Sciences, Anhui University, Hefei City, Anhui 230601, P. R. China.
Oncotarget. 2016 Nov 8;7(45):73945-73959. doi: 10.18632/oncotarget.12154.
Genome-wide association studies (GWAS) on colorectal cancer (CRC) have identified dozens of single nucleotide polymorphisms (SNPs) in more than 19 independent loci associated with CRC. Due to the heterogeneity of the studied subjects and the contrary results, it is challenging to verify the certainty of the association between these loci and CRC.We conducted a critical review of the published studies of SNPs associated with CRC. Five most frequently reported SNPs, which are rs6983267/8q24.21, rs4939827/18q21.1, rs10795668/10p14, rs4444235/14q22.2 and rs4779584/ 15q13.3, were selected for the current study from the qualified studies. Then meta-analyses based on larger sample sizes with average of 33,000 CRC cases and 34,000 controls were performed to assess the association between SNPs and CRC risk. Heterogeneity among studies and publication bias were assessed by the χ2-based Q statistic test Begg's funnel plot or Egger's test, respectively.Our meta-analysis confirmed significant associations of the five SNPs with CRC risk under different genetic models. Two risk variants at rs6983267 {Odds Ratio (OR) 1.388, 95% Confidence Interval (CI) 1.180-1.8633} and rs10795668 (OR 1.323, 95% CI 1.062-1.648) had the highest ORs in homogeneous model. While ORs of the other three variants at rs4939827 {OR 1.298, 95% CI 1.135-1.483}, rs4779584 (OR 1.261, 95% CI 1.146-1.386) and rs4444235 (OR 1.160, 95% CI 1.106-1.216) were also statistically significant. Sensitivity analyses and publication bias assessment indicated the robust stability and reliability of the results.
全基因组关联研究(GWAS)针对结直肠癌(CRC)已在超过19个与CRC相关的独立基因座中鉴定出数十个单核苷酸多态性(SNP)。由于研究对象的异质性以及相互矛盾的结果,要证实这些基因座与CRC之间关联的确定性具有挑战性。我们对已发表的与CRC相关的SNP研究进行了批判性综述。从合格研究中选取了五个最常报道的SNP,即rs6983267/8q24.21、rs4939827/18q21.1、rs10795668/10p14、rs4444235/14q22.2和rs4779584/15q13.3,用于当前研究。然后基于平均有33,000例CRC病例和34,000例对照的更大样本量进行荟萃分析,以评估SNP与CRC风险之间的关联。分别通过基于χ2的Q统计检验、Begg漏斗图或Egger检验评估研究间的异质性和发表偏倚。我们的荟萃分析证实了这五个SNP在不同遗传模型下与CRC风险存在显著关联。rs6983267的两个风险变异位点{比值比(OR)1.388,95%置信区间(CI)1.180 - 1.8633}和rs10795668(OR 1.323,95% CI 1.062 - 1.648)在同质模型中具有最高的OR值。而rs4939827的其他三个变异位点的OR值{OR 1.298,95% CI 1.135 - 1.483}、rs4779584(OR 1.261,95% CI 1.146 - 1.386)和rs4444235(OR 1.160,95% CI 1.106 - 1.216)也具有统计学意义。敏感性分析和发表偏倚评估表明结果具有稳健的稳定性和可靠性。