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固氮酶铁蛋白电子传递循环中的负协同效应。

Negative cooperativity in the nitrogenase Fe protein electron delivery cycle.

作者信息

Danyal Karamatullah, Shaw Sudipta, Page Taylor R, Duval Simon, Horitani Masaki, Marts Amy R, Lukoyanov Dmitriy, Dean Dennis R, Raugei Simone, Hoffman Brian M, Seefeldt Lance C, Antony Edwin

机构信息

Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322.

Department of Chemistry, Northwestern University, Evanston, IL 60208.

出版信息

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):E5783-E5791. doi: 10.1073/pnas.1613089113.

Abstract

Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N) to two ammonia (NH) molecules through the participation of its two protein components, the MoFe and Fe proteins. Electron transfer (ET) from the Fe protein to the catalytic MoFe protein involves a series of synchronized events requiring the transient association of one Fe protein with each αβ half of the αβ MoFe protein. This process is referred to as the Fe protein cycle and includes binding of two ATP to an Fe protein, association of an Fe protein with the MoFe protein, ET from the Fe protein to the MoFe protein, hydrolysis of the two ATP to two ADP and two P for each ET, P release, and dissociation of oxidized Fe protein-(ADP) from the MoFe protein. Because the MoFe protein tetramer has two separate αβ active units, it participates in two distinct Fe protein cycles. Quantitative kinetic measurements of ET, ATP hydrolysis, and P release during the presteady-state phase of electron delivery demonstrate that the two halves of the ternary complex between the MoFe protein and two reduced Fe protein-(ATP) do not undergo the Fe protein cycle independently. Instead, the data are globally fit with a two-branch negative-cooperativity kinetic model in which ET in one-half of the complex partially suppresses this process in the other. A possible mechanism for communication between the two halves of the nitrogenase complex is suggested by normal-mode calculations showing correlated and anticorrelated motions between the two halves.

摘要

固氮酶通过其两种蛋白质成分,即钼铁蛋白和铁蛋白,催化ATP依赖的将二氮(N₂)还原为两个氨(NH₃)分子的反应。电子从铁蛋白转移至催化性的钼铁蛋白涉及一系列同步事件,需要一个铁蛋白与αβ钼铁蛋白的每个αβ半体瞬时结合。这个过程被称为铁蛋白循环,包括两个ATP与一个铁蛋白结合、一个铁蛋白与钼铁蛋白结合、电子从铁蛋白转移至钼铁蛋白、每次电子转移时两个ATP水解为两个ADP和两个Pi、Pi释放以及氧化型铁蛋白 - (ADP)从钼铁蛋白解离。由于钼铁蛋白四聚体有两个独立的αβ活性单元,它参与两个不同的铁蛋白循环。在电子传递的预稳态阶段对电子转移、ATP水解和Pi释放进行的定量动力学测量表明,钼铁蛋白与两个还原型铁蛋白 - (ATP)之间三元复合物的两个半体不会独立进行铁蛋白循环。相反,数据全局拟合为一个双分支负协同动力学模型,其中复合物一半中的电子转移会部分抑制另一半中的这一过程。正常模式计算显示复合物两半之间存在相关和反相关运动,这提示了固氮酶复合物两半之间可能的通讯机制。

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Electron transfer precedes ATP hydrolysis during nitrogenase catalysis.在氮酶催化过程中,电子转移先于 ATP 水解。
Proc Natl Acad Sci U S A. 2013 Oct 8;110(41):16414-9. doi: 10.1073/pnas.1311218110. Epub 2013 Sep 23.
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Nitrogenase: a draft mechanism.固氮酶:一个草案机制。
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Electron transfer in nitrogenase catalysis.氮酶催化中的电子转移。
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