Suppr超能文献

渗透压对内在无序蛋白质折叠倾向的影响

Folding propensity of intrinsically disordered proteins by osmotic stress.

作者信息

Mansouri Amanda L, Grese Laura N, Rowe Erica L, Pino James C, Chennubhotla S Chakra, Ramanathan Arvind, O'Neill Hugh M, Berthelier Valerie, Stanley Christopher B

机构信息

Department of Medicine, Graduate School of Medicine, University of Tennessee, Health Science Center, Knoxville, TN, USA.

Department of Medicine, Graduate School of Medicine, University of Tennessee, Health Science Center, Knoxville, TN, USA and Biology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.

出版信息

Mol Biosyst. 2016 Nov 15;12(12):3695-3701. doi: 10.1039/c6mb00512h.

Abstract

Proteins imparted with intrinsic disorder conduct a range of essential cellular functions. To better understand the folding and hydration properties of intrinsically disordered proteins (IDPs), we used osmotic stress to induce conformational changes in nuclear co-activator binding domain (NCBD) and activator for thyroid hormone and retinoid receptor (ACTR) separate from their mutual binding. Osmotic stress was applied by the addition of small and polymeric osmolytes, where we discovered that water contributions to NCBD folding always exceeded those for ACTR. Both NCBD and ACTR were found to gain α-helical structure with increasing osmotic stress, consistent with their folding upon NCBD/ACTR complex formation. Using small-angle neutron scattering (SANS), we further characterized NCBD structural changes with the osmolyte ethylene glycol. Here a large reduction in overall size initially occurred before substantial secondary structural change. By focusing on folding propensity, and linked hydration changes, we uncover new insights that may be important for how IDP folding contributes to binding.

摘要

具有内在无序性的蛋白质执行一系列重要的细胞功能。为了更好地理解内在无序蛋白质(IDP)的折叠和水合特性,我们利用渗透压诱导核共激活因子结合域(NCBD)和甲状腺激素及类视黄醇受体激活剂(ACTR)发生构象变化,使其相互分离。通过添加小分子和聚合渗透剂来施加渗透压,我们发现水对NCBD折叠的贡献总是超过对ACTR的贡献。随着渗透压的增加,NCBD和ACTR均获得α螺旋结构,这与它们在形成NCBD/ACTR复合物时的折叠情况一致。利用小角中子散射(SANS),我们进一步用渗透剂乙二醇表征了NCBD的结构变化。在此过程中,整体尺寸最初大幅减小,之后才发生显著的二级结构变化。通过关注折叠倾向以及相关的水合变化,我们揭示了一些新的见解,这些见解对于IDP折叠如何促进结合可能具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6012/5363718/fa568b772859/nihms852281f1.jpg

相似文献

5
Helical propensity in an intrinsically disordered protein accelerates ligand binding.无规卷曲蛋白的螺旋倾向加速配体结合。
Angew Chem Int Ed Engl. 2014 Feb 3;53(6):1548-51. doi: 10.1002/anie.201307712. Epub 2014 Jan 21.

引用本文的文献

7
Proteins: "Boil 'Em, Mash 'Em, Stick 'Em in a Stew".蛋白质:“煮它们,捣它们,炖它们”。
J Phys Chem B. 2019 Oct 10;123(40):8341-8350. doi: 10.1021/acs.jpcb.9b05467. Epub 2019 Sep 26.

本文引用的文献

3
JPred4: a protein secondary structure prediction server.JPred4:一种蛋白质二级结构预测服务器。
Nucleic Acids Res. 2015 Jul 1;43(W1):W389-94. doi: 10.1093/nar/gkv332. Epub 2015 Apr 16.
4
Effects of macromolecular crowding on the collapse of biopolymers.大分子拥挤对生物聚合物折叠的影响。
Phys Rev Lett. 2015 Feb 13;114(6):068303. doi: 10.1103/PhysRevLett.114.068303.
7
What macromolecular crowding can do to a protein.大分子拥挤对蛋白质会产生何种影响。
Int J Mol Sci. 2014 Dec 12;15(12):23090-140. doi: 10.3390/ijms151223090.
8
Unified description of solvent effects in the helix-coil transition.螺旋-线圈转变中溶剂效应的统一描述
Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022723. doi: 10.1103/PhysRevE.89.022723. Epub 2014 Feb 26.
10
Macromolecular crowding effects on coupled folding and binding.大分子拥挤对耦合折叠和结合的影响。
J Phys Chem B. 2014 Nov 6;118(44):12621-9. doi: 10.1021/jp508046y. Epub 2014 Oct 23.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验