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食肉茅膏菜(圆叶茅膏菜)I类内切几丁质酶的结构与功能表征

Structural and functional characterisation of a class I endochitinase of the carnivorous sundew (Drosera rotundifolia L.).

作者信息

Jopcik Martin, Moravcikova Jana, Matusikova Ildiko, Bauer Miroslav, Rajninec Miroslav, Libantova Jana

机构信息

Institute of Plant Genetics and Biotechnology, Slovak Academy of Sciences, P.O. Box 39A, 950 07, Nitra, Slovak Republic.

NAFC Research Institute for Animal Production, Nitra, Hlohovska 2, 951 41, Lužianky, Slovak Republic.

出版信息

Planta. 2017 Feb;245(2):313-327. doi: 10.1007/s00425-016-2608-1. Epub 2016 Oct 19.

Abstract

Chitinase gene from the carnivorous plant, Drosera rotundifolia , was cloned and functionally characterised. Plant chitinases are believed to play an important role in the developmental and physiological processes and in responses to biotic and abiotic stress. In addition, there is growing evidence that carnivorous plants can use them to digest insect prey. In this study, a full-length genomic clone consisting of the 1665-bp chitinase gene (gDrChit) and adjacent promoter region of the 698 bp in length were isolated from Drosera rotundifolia L. using degenerate PCR and a genome-walking approach. The corresponding coding sequence of chitinase gene (DrChit) was obtained following RNA isolation from the leaves of aseptically grown in vitro plants, cDNA synthesis with a gene-specific primer and PCR amplification. The open reading frame of cDNA clone consisted of 978 nucleotides and encoded 325 amino acid residues. Sequence analysis indicated that DrChit belongs to the class I group of plant chitinases. Phylogenetic analysis within the Caryophyllales class I chitinases demonstrated a significant evolutionary relatedness of DrChit with clade Ib, which contains the extracellular orthologues that play a role in carnivory. Comparative expression analysis revealed that the DrChit is expressed predominantly in tentacles and is up-regulated by treatment with inducers that mimick insect prey. Enzymatic activity of rDrChit protein expressed in Escherichia coli was confirmed and purified protein exhibited a long oligomer-specific endochitinase activity on glycol-chitin and FITC-chitin. The isolation and expression profile of a chitinase gene from D. rotundifolia has not been reported so far. The obtained results support the role of specific chitinases in digestive processes in carnivorous plant species.

摘要

克隆并对食虫植物圆叶茅膏菜的几丁质酶基因进行了功能表征。植物几丁质酶被认为在发育和生理过程以及对生物和非生物胁迫的反应中发挥重要作用。此外,越来越多的证据表明食虫植物可以利用它们来消化昆虫猎物。在本研究中,使用简并PCR和基因组步移方法从圆叶茅膏菜中分离出一个全长基因组克隆,该克隆由1665 bp的几丁质酶基因(gDrChit)和长度为698 bp的相邻启动子区域组成。从无菌培养的离体植物叶片中分离RNA,用基因特异性引物进行cDNA合成并进行PCR扩增,从而获得几丁质酶基因(DrChit)的相应编码序列。cDNA克隆的开放阅读框由978个核苷酸组成,编码325个氨基酸残基。序列分析表明,DrChit属于植物几丁质酶的I类。石竹目I类几丁质酶的系统发育分析表明,DrChit与进化枝Ib具有显著的进化相关性,进化枝Ib包含在食肉过程中起作用的细胞外直系同源物。比较表达分析表明,DrChit主要在触须中表达,并通过用模拟昆虫猎物的诱导剂处理而上调。证实了在大肠杆菌中表达的rDrChit蛋白的酶活性,纯化后的蛋白对糖基几丁质和FITC-几丁质表现出长链寡聚物特异性内切几丁质酶活性。迄今为止,尚未报道过圆叶茅膏菜几丁质酶基因的分离和表达谱。所得结果支持特定几丁质酶在食虫植物物种消化过程中的作用。

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