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印度东北部印缅地区温泉中的细菌和古细菌群落组成。

Bacterial and archeal community composition in hot springs from Indo-Burma region, North-east India.

作者信息

Panda Amrita Kumari, Bisht Satpal Singh, De Mandal Surajit, Kumar Nachimuthu Senthil

机构信息

Department of Zoology, Kumaun University, Nainital, Uttarakhand, 263002, India.

Department of Biotechnology, Mizoram University, Aizawl, Mizoram, 796004, India.

出版信息

AMB Express. 2016 Dec;6(1):111. doi: 10.1186/s13568-016-0284-y. Epub 2016 Nov 10.

Abstract

Bacterial and archaeal diversity of two alkaline Indian hot springs, Jakrem (Meghalaya) and Yumthang (Sikkim), were studied. Thirteen major bacterial phyla were identified of which Firmicutes, Chloroflexi and Thermi were dominant in Jakrem and Proteobacteria in Yumthang. The dominant genera were Clostridium, Chloroflexus and Meiothermus at Jakrem (water temperature 46 °C, pH 9) and Thiobacillus, Sulfuritalea at Yumthang (water temperature 39 °C, pH 8) hot springs. The four Euryarchaeota taxa that were observed in both the hot springs were Methanoculleus, Methanosaeta, Methanosarcina and Methanocorposculum. Elstera litoralis, Thiovirga sp., Turneriella sp. were observed for the first time in association with hot springs along with Tepidibacter sp., Ignavibacterium sp., Teribacillus sp. and Dechloromonas sp. Individual bacterial phyla were found to be specifically correlated with certain physico-chemical factors such as temperature, dissolved SiO, elemental S, total sulphide, calcium concentrations in hot spring water. Bacterial reads involved in sulfur cycle were identified in both16S rRNA gene library and sulfur metabolism may play key physiological functions in this hot spring. Members within Desulfobacterales and Thermodesulfovibrionaceae were identified and hypothesized their role in regulating sulfur cycle. The presence of many taxonomically unsolved sequences in the 16S rRNA gene tag datasets from these hot springs could be a sign of novel microbe richness in these less known hot water bodies of Northeastern India.

摘要

对印度两个碱性温泉——贾克雷姆(梅加拉亚邦)和尤姆唐(锡金邦)的细菌和古菌多样性进行了研究。共鉴定出13个主要细菌门,其中厚壁菌门、绿弯菌门和栖热菌门在贾克雷姆温泉中占主导地位,而变形菌门在尤姆唐温泉中占主导地位。在贾克雷姆温泉(水温46°C,pH值9)中,优势属为梭菌属、绿弯菌属和嗜热栖热菌属;在尤姆唐温泉(水温39°C,pH值8)中,优势属为硫杆菌属和硫硫杆菌属。在这两个温泉中均观察到的四个广古菌门分类群为甲烷袋状菌属、甲烷八叠球菌属、甲烷嗜热菌属和甲烷球囊菌属。首次观察到滨海埃尔斯菌、硫弧菌属、特纳里拉菌属与温泉相关,同时还发现了嗜温杆菌属、懒惰杆菌属、地芽孢杆菌属和脱氯单胞菌属。发现个别细菌门与某些物理化学因素存在特定相关性,如温泉水中的温度、溶解二氧化硅、元素硫、总硫化物、钙浓度。在16S rRNA基因文库中均鉴定出参与硫循环的细菌读数,硫代谢可能在该温泉中发挥关键生理功能。鉴定出脱硫杆菌目和嗜热脱硫弧菌科的成员,并推测了它们在调节硫循环中的作用。这些温泉的16S rRNA基因标签数据集中存在许多分类学上未解决的序列,这可能表明印度东北部这些鲜为人知的热水体中存在新的微生物丰富度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0966/5104702/117324613b1d/13568_2016_284_Fig1_HTML.jpg

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