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Bidirectional RNN for Medical Event Detection in Electronic Health Records.

作者信息

Jagannatha Abhyuday N, Yu Hong

机构信息

University of Massachusetts, MA, USA.

University of Massachusetts, MA, USA; Bedford VAMC and CHOIR, MA, USA.

出版信息

Proc Conf. 2016 Jun;2016:473-482. doi: 10.18653/v1/n16-1056.


DOI:10.18653/v1/n16-1056
PMID:27885364
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5119627/
Abstract

Sequence labeling for extraction of medical events and their attributes from unstructured text in Electronic Health Record (EHR) notes is a key step towards semantic understanding of EHRs. It has important applications in health informatics including pharmacovigilance and drug surveillance. The state of the art supervised machine learning models in this domain are based on Conditional Random Fields (CRFs) with features calculated from fixed context windows. In this application, we explored recurrent neural network frameworks and show that they significantly out-performed the CRF models.

摘要

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本文引用的文献

[1]
Automatically Recognizing Medication and Adverse Event Information From Food and Drug Administration's Adverse Event Reporting System Narratives.

JMIR Med Inform. 2014-6-27

[2]
A novel method of adverse event detection can accurately identify venous thromboembolisms (VTEs) from narrative electronic health record data.

J Am Med Inform Assoc. 2015-1

[3]
Evaluating the state of the art in disorder recognition and normalization of the clinical narrative.

J Am Med Inform Assoc. 2015-1

[4]
Methods for identifying suicide or suicidal ideation in EHRs.

AMIA Annu Symp Proc. 2012

[5]
Lancet: a high precision medication event extraction system for clinical text.

J Am Med Inform Assoc. 2010

[6]
MedEx: a medication information extraction system for clinical narratives.

J Am Med Inform Assoc. 2010

[7]
Learning long-term dependencies with gradient descent is difficult.

IEEE Trans Neural Netw. 1994

[8]
Overview of BioCreAtIvE: critical assessment of information extraction for biology.

BMC Bioinformatics. 2005

[9]
MediClass: A system for detecting and classifying encounter-based clinical events in any electronic medical record.

J Am Med Inform Assoc. 2005

[10]
Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Proc AMIA Symp. 2001

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