Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE), Centro Nacional de Pesquisa em Energia e Materiais (CNPEM), Campinas, SP, Brazil.
Department of Biochemistry and Tissue Biology, Institute of Biology, State University of Campinas, Campinas, SP, Brazil.
Appl Microbiol Biotechnol. 2017 Apr;101(7):2893-2903. doi: 10.1007/s00253-016-8014-6. Epub 2016 Dec 24.
Xyloglucan is the most abundant hemicellulose in primary walls of spermatophytes except for grasses. Xyloglucan-degrading enzymes are important in lignocellulosic biomass hydrolysis because they remove xyloglucan, which is abundant in monocot-derived biomass. Fungal genomes encode numerous xyloglucanase genes, belonging to at least six glycoside hydrolase (GH) families. GH74 endo-xyloglucanases cleave xyloglucan backbones with unsubstituted glucose at the -1 subsite or prefer xylosyl-substituted residues in the -1 subsite. In this work, 137 GH74-related genes were detected by examining 293 Eurotiomycete genomes and Ascomycete fungi contained one or no GH74 xyloglucanase gene per genome. Another interesting feature is that the triad of tryptophan residues along the catalytic cleft was found to be widely conserved among Ascomycetes. The GH74 from Aspergillus fumigatus (AfXEG74) was chosen as an example to conduct comprehensive biochemical studies to determine the catalytic mechanism. AfXEG74 has no CBM and cleaves the xyloglucan backbone between the unsubstituted glucose and xylose-substituted glucose at specific positions, along the XX motif when linked to regions deprived of galactosyl branches. It resembles an endo-processive activity, which after initial random hydrolysis releases xyloglucan-oligosaccharides as major reaction products. This work provides insights on phylogenetic diversity and catalytic mechanism of GH74 xyloglucanases from Ascomycete fungi.
木葡聚糖是除禾本科植物以外的有性植物初生壁中最丰富的半纤维素。木葡聚糖降解酶在木质纤维素生物质水解中很重要,因为它们可以去除丰富的来源于单子叶植物的生物质中的木葡聚糖。真菌基因组编码了许多木葡聚糖酶基因,这些基因属于至少六个糖苷水解酶(GH)家族。GH74 内切木葡聚糖酶可以在 -1 亚位点处没有取代的葡萄糖或优先在 -1 亚位点处含有木糖取代的残基处切割木葡聚糖骨架。在这项工作中,通过检查 293 个曲霉属和子囊菌真菌的基因组,检测到了 137 个 GH74 相关基因,每个基因组中包含一个或没有 GH74 木葡聚糖酶基因。另一个有趣的特征是,沿着催化裂缝的三个色氨酸残基在子囊菌中被广泛保守。选择烟曲霉(AfXEG74)的 GH74 作为一个例子来进行全面的生化研究,以确定其催化机制。AfXEG74 没有 CBM,并且在特定位置处切割没有取代的葡萄糖和木糖取代的葡萄糖之间的木葡聚糖骨架,当与缺乏半乳糖支链的区域连接时沿着 XX 基序。它类似于一个内切活性,在初始随机水解后释放木葡聚糖低聚糖作为主要的反应产物。这项工作提供了有关子囊菌真菌 GH74 木葡聚糖酶的系统发育多样性和催化机制的见解。