Zhou Yong, Prakash Priyanka, Liang Hong, Cho Kwang-Jin, Gorfe Alemayehu A, Hancock John F
Department of Integrative Biology and Pharmacology, McGovern Medical School, University of Texas Health Science Center at Houston, TX 77030, USA.
Department of Integrative Biology and Pharmacology, McGovern Medical School, University of Texas Health Science Center at Houston, TX 77030, USA.
Cell. 2017 Jan 12;168(1-2):239-251.e16. doi: 10.1016/j.cell.2016.11.059. Epub 2016 Dec 29.
K-Ras is targeted to the plasma membrane by a C-terminal membrane anchor that comprises a farnesyl-cysteine-methyl-ester and a polybasic domain. We used quantitative spatial imaging and atomistic molecular dynamics simulations to examine molecular details of K-Ras plasma membrane binding. We found that the K-Ras anchor binds selected plasma membrane anionic lipids with defined head groups and lipid side chains. The precise amino acid sequence and prenyl group define a combinatorial code for lipid binding that extends beyond simple electrostatics; within this code lysine and arginine residues are non-equivalent and prenyl chain length modifies nascent polybasic domain lipid preferences. The code is realized by distinct dynamic tertiary structures of the anchor on the plasma membrane that govern amino acid side-chain-lipid interactions. An important consequence of this specificity is the ability of such anchors when aggregated to sort subsets of phospholipids into nanoclusters with defined lipid compositions that determine K-Ras signaling output.
K-Ras通过一个包含法尼基半胱氨酸甲酯和多碱性结构域的C末端膜锚定结构靶向定位于质膜。我们使用定量空间成像和原子分子动力学模拟来研究K-Ras质膜结合的分子细节。我们发现K-Ras锚定结构与具有特定头部基团和脂质侧链的选定质膜阴离子脂质结合。精确的氨基酸序列和异戊二烯基团定义了一种脂质结合的组合密码,其超出了简单的静电作用;在这个密码中,赖氨酸和精氨酸残基并不等同,异戊二烯链长度会改变新生多碱性结构域的脂质偏好。该密码通过质膜上锚定结构的不同动态三级结构实现,这些结构控制氨基酸侧链与脂质的相互作用。这种特异性的一个重要结果是,当这些锚定结构聚集时,它们能够将磷脂亚群分选到具有确定脂质组成的纳米簇中,这些脂质组成决定了K-Ras信号输出。