Yu Guohua, Zhang Yanqiong, Ren Weiqiong, Dong Ling, Li Junfang, Geng Ya, Zhang Yi, Li Defeng, Xu Haiyu, Yang Hongjun
School of Chinese Materia Medica, Beijing University of Chinese Medicine; Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing.
Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing.
Int J Chron Obstruct Pulmon Dis. 2016 Dec 22;12:85-94. doi: 10.2147/COPD.S121079. eCollection 2017.
For decades in China, the Yin-Huang-Qing-Fei capsule (YHQFC) has been widely used in the treatment of chronic bronchitis, with good curative effects. Owing to the complexity of traditional Chinese herbal formulas, the pharmacological mechanism of YHQFC remains unclear. To address this problem, a network pharmacology-based strategy was proposed in this study. At first, the putative target profile of YHQFC was predicted using MedChem Studio, based on structural and functional similarities of all available YHQFC components to the known drugs obtained from the DrugBank database. Then, an interaction network was constructed using links between putative YHQFC targets and known therapeutic targets of chronic bronchitis. Following the calculation of four topological features (degree, betweenness, closeness, and coreness) of each node in the network, 475 major putative targets of YHQFC and their topological importance were identified. In addition, a pathway enrichment analysis based on the Kyoto Encyclopedia of Genes and Genomes pathway database indicated that the major putative targets of YHQFC are significantly associated with various pathways involved in anti-inflammation processes, immune responses, and pathological changes caused by asthma. More interestingly, eight major putative targets of YHQFC (interleukin [IL]-3, IL-4, IL-5, IL-10, IL-13, FCER1G, CCL11, and EPX) were demonstrated to be associated with the inflammatory process that occurs during the progression of asthma. Finally, a molecular docking simulation was performed and the results exhibited that 17 pairs of chemical components and candidate YHQFC targets involved in asthma pathway had strong binding efficiencies. In conclusion, this network pharmacology-based investigation revealed that YHQFC may attenuate the inflammatory reaction of chronic bronchitis by regulating its candidate targets, which may be implicated in the major pathological processes of the asthma pathway.
在中国,银黄清肺胶囊(YHQFC)已被广泛用于治疗慢性支气管炎数十年,疗效良好。由于中药配方的复杂性,YHQFC的药理机制尚不清楚。为了解决这个问题,本研究提出了一种基于网络药理学的策略。首先,基于YHQFC所有可用成分与从DrugBank数据库获得的已知药物的结构和功能相似性,使用MedChem Studio预测YHQFC的假定靶点谱。然后,利用YHQFC假定靶点与慢性支气管炎已知治疗靶点之间的联系构建相互作用网络。在计算网络中每个节点的四个拓扑特征(度、介数、紧密性和核数)后,确定了YHQFC的475个主要假定靶点及其拓扑重要性。此外,基于京都基因与基因组百科全书通路数据库的通路富集分析表明,YHQFC的主要假定靶点与抗炎过程、免疫反应和哮喘引起的病理变化所涉及的各种通路显著相关。更有趣的是,YHQFC的八个主要假定靶点(白细胞介素[IL]-3、IL-4、IL-5、IL-10、IL-13、FCER1G、CCL11和EPX)被证明与哮喘进展过程中发生的炎症过程相关。最后,进行了分子对接模拟,结果表明参与哮喘通路的17对化学成分与YHQFC候选靶点具有很强的结合效率。总之,这项基于网络药理学的研究表明,YHQFC可能通过调节其候选靶点来减轻慢性支气管炎的炎症反应,这些靶点可能与哮喘通路的主要病理过程有关。