Laboratory of Genetically Encoded Small Molecules and ‡Proteomics Resource Center, The Rockefeller University , New York, New York 10065, United States.
Department of Pharmacology, Physiology, and Neuroscience and ∥Public Health Research Institute, Rutgers University , Newark, New Jersey 07103, United States.
J Am Chem Soc. 2017 Feb 1;139(4):1404-1407. doi: 10.1021/jacs.6b11861. Epub 2017 Jan 23.
Bacterial culture broth extracts have been the starting point for the development of numerous therapeutics. However, only a small fraction of bacterial biosynthetic diversity is accessible using this strategy. Here, we apply a discovery approach that bypasses the culturing step entirely by bioinformatically predicting small molecule structures from the primary sequences of the biosynthetic gene clusters. These structures are then chemically synthesized to give synthetic-bioinformatic natural products (syn-BNPs). Using this approach, we screened syn-BNPs inspired by nonribosomal peptide synthetases against microbial pathogens, and discovered an antibiotic for which no resistance could be identified and an antifungal agent with activity against diverse fungal pathogens.
细菌培养液提取物一直是许多治疗方法的起点。然而,使用这种策略只能获得细菌生物合成多样性的一小部分。在这里,我们应用了一种完全绕过培养步骤的发现方法,即通过生物信息学从生物合成基因簇的原始序列中预测小分子结构。然后,这些结构被化学合成,得到合成生物信息天然产物(syn-BNP)。使用这种方法,我们筛选了受非核糖体肽合成酶启发的 syn-BNP 对微生物病原体的作用,发现了一种抗生素,对其没有发现耐药性,还有一种抗真菌剂对多种真菌病原体具有活性。