Cho Hyunjun, Kim Mincheol, Tripathi Binu, Adams Jonathan
Department of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, 151-742, South Korea.
Korea Polar Research Institute (KOPRI), Incheon, 460-840, Republic of Korea.
Microb Ecol. 2017 Jul;74(1):62-77. doi: 10.1007/s00248-016-0919-1. Epub 2017 Jan 6.
Although disturbance is thought to be important in many ecological processes, responses of fungal communities to soil disturbance have been little studied experimentally. We subjected a soil microcosm to physical disturbance, at a range of frequencies designed to simulate ecological disturbance events. We analyzed the fungal community structure using Illumina HiSeq sequencing of the ITS1 region. Fungal diversity was found to decline with the increasing disturbance frequencies, with no sign of the "humpback" pattern found in many studies of larger sedentary organisms. There is thus no evidence of an effect of release from competition resulting from moderate disturbance-which suggests that competition and niche overlap may not be important in limiting soil fungal diversity. Changing disturbance frequency also led to consistent differences in community composition. There were clear differences in OTU-level composition, with different disturbance treatments each having distinct fungal communities. The functional profile of fungal groups (guilds) was changed by the level of disturbance frequency. These predictable differences in community composition suggest that soil fungi can possess different niches in relation to disturbance frequency, or time since last disturbance. Fungi appear to be most abundant relative to bacteria at intermediate disturbance frequencies, on the time scale we studied here.
尽管干扰在许多生态过程中被认为很重要,但真菌群落对土壤干扰的响应在实验研究中却很少。我们对土壤微观世界进行了物理干扰,干扰频率范围旨在模拟生态干扰事件。我们使用ITS1区域的Illumina HiSeq测序分析了真菌群落结构。发现真菌多样性随着干扰频率的增加而下降,在许多对较大定居生物的研究中未发现“驼背”模式的迹象。因此,没有证据表明适度干扰会导致竞争释放效应——这表明竞争和生态位重叠在限制土壤真菌多样性方面可能并不重要。改变干扰频率也导致群落组成出现一致差异。在OTU水平组成上存在明显差异,不同的干扰处理各自具有独特的真菌群落。真菌类群(功能组)的功能概况因干扰频率水平而改变。群落组成的这些可预测差异表明,土壤真菌在与干扰频率或上次干扰后的时间相关方面可能具有不同的生态位。在我们这里研究的时间尺度上,在中等干扰频率下,相对于细菌而言,真菌似乎最为丰富。