• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于连通性驱动表面映射的黎曼度量优化

Riemannian Metric Optimization for Connectivity-driven Surface Mapping.

作者信息

Gahm Jin Kyu, Shi Yonggang

机构信息

Laboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine, University of Southern California, Los Angeles, USA.

出版信息

Med Image Comput Comput Assist Interv. 2016 Oct;9900:228-236. doi: 10.1007/978-3-319-46720-7_27. Epub 2016 Oct 2.

DOI:10.1007/978-3-319-46720-7_27
PMID:28083569
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5223768/
Abstract

With the advance of human connectome research, there are great interests in computing diffeomorphic maps of brain surfaces with rich connectivity features. In this paper, we propose a novel framework for connectivity-driven surface mapping based on Riemannian metric optimization on surfaces (RMOS) in the Laplace-Beltrami (LB) embedding space. The mathematical foundation of our method is that we can use the pullback metric to define an isometry between surfaces for an arbitrary diffeomorphism, which in turn results in identical LB embeddings from the two surfaces. For connectivity-driven surface mapping, our goal is to compute a diffeomorphism that can match a set of connectivity features defined over anatomical surfaces. The proposed RMOS approach achieves this goal by iteratively optimizing the Riemannian metric on surfaces to match the connectivity features in the LB embedding space. At the core of our framework is an optimization approach that converts the cost function of connectivity features into a distance measure in the LB embedding space, and optimizes it using gradients of the LB eigen-system with respect to the Riemannian metric. We demonstrate our method on the mapping of thalamic surfaces according to connectivity to ten cortical regions, which we compute with the multi-shell diffusion imaging data from the Human Connectome Project (HCP). Comparisons with a state-of-the-art method show that the RMOS method can more effectively match anatomical features and detect thalamic atrophy due to normal aging.

摘要

随着人类连接组研究的进展,人们对计算具有丰富连接特征的脑表面微分同胚映射产生了浓厚兴趣。在本文中,我们基于拉普拉斯 - 贝尔特拉米(LB)嵌入空间中表面的黎曼度量优化(RMOS),提出了一种用于连接驱动表面映射的新框架。我们方法的数学基础是,对于任意微分同胚,我们可以使用回拉度量来定义表面之间的等距,这反过来会导致两个表面具有相同的LB嵌入。对于连接驱动的表面映射,我们的目标是计算一个能匹配在解剖表面上定义的一组连接特征的微分同胚。所提出的RMOS方法通过迭代优化表面上的黎曼度量以匹配LB嵌入空间中的连接特征来实现这一目标。我们框架的核心是一种优化方法,它将连接特征的成本函数转换为LB嵌入空间中的距离度量,并使用LB特征系统相对于黎曼度量的梯度对其进行优化。我们根据与十个皮质区域的连接性,在丘脑表面映射上展示了我们的方法,这是我们使用来自人类连接组计划(HCP)的多壳扩散成像数据计算得出的。与一种先进方法的比较表明,RMOS方法能够更有效地匹配解剖特征,并检测出由于正常衰老导致的丘脑萎缩。

相似文献

1
Riemannian Metric Optimization for Connectivity-driven Surface Mapping.用于连通性驱动表面映射的黎曼度量优化
Med Image Comput Comput Assist Interv. 2016 Oct;9900:228-236. doi: 10.1007/978-3-319-46720-7_27. Epub 2016 Oct 2.
2
Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space.曲面的黎曼度量优化(RMOS)在拉普拉斯-贝尔特拉米嵌入空间中的内在脑图谱绘制。
Med Image Anal. 2018 May;46:189-201. doi: 10.1016/j.media.2018.03.004. Epub 2018 Mar 16.
3
Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space.拉普拉斯-贝尔特拉米嵌入空间中纹状体表面的整体映射
Med Image Comput Comput Assist Interv. 2017 Sep;10433:21-30. doi: 10.1007/978-3-319-66182-7_3. Epub 2017 Sep 4.
4
G-RMOS: GPU-accelerated Riemannian Metric Optimization on Surfaces.G-RMOS:基于 GPU 的曲面上黎曼度量优化。
Comput Biol Med. 2022 Nov;150:106167. doi: 10.1016/j.compbiomed.2022.106167. Epub 2022 Oct 4.
5
Metric optimization for surface analysis in the Laplace-Beltrami embedding space.拉普拉斯 - 贝尔特拉米嵌入空间中用于表面分析的度量优化
IEEE Trans Med Imaging. 2014 Jul;33(7):1447-63. doi: 10.1109/TMI.2014.2313812. Epub 2014 Mar 25.
6
Patch-based Mapping of Transentorhinal Cortex with a Distributed Atlas.基于分布式图谱的内嗅皮质局部映射
Med Image Comput Comput Assist Interv. 2018 Sep;11072:689-697. doi: 10.1007/978-3-030-00931-1_79. Epub 2018 Sep 13.
7
Conformal metric optimization on surface (CMOS) for deformation and mapping in Laplace-Beltrami embedding space.拉普拉斯-贝尔特拉米嵌入空间中用于变形和映射的表面共形度量优化(CMOS)
Med Image Comput Comput Assist Interv. 2011;14(Pt 2):327-34. doi: 10.1007/978-3-642-23629-7_40.
8
Surface-driven registration method for the structure-informed segmentation of diffusion MR images.用于扩散磁共振图像结构信息分割的表面驱动配准方法
Neuroimage. 2016 Oct 1;139:450-461. doi: 10.1016/j.neuroimage.2016.05.011. Epub 2016 May 7.
9
FOD Restoration for Enhanced Mapping of White Matter Lesion Connectivity.用于增强白质病变连通性映射的纤维束定向分布恢复技术
Med Image Comput Comput Assist Interv. 2017 Sep;10433:584-592. doi: 10.1007/978-3-319-66182-7_67. Epub 2017 Sep 4.
10
Diffeomorphic metric mapping of high angular resolution diffusion imaging based on Riemannian structure of orientation distribution functions.基于各向异性分布函数黎曼结构的高角分辨率弥散成像的仿射度量映射。
IEEE Trans Med Imaging. 2012 May;31(5):1021-33. doi: 10.1109/TMI.2011.2178253. Epub 2011 Dec 6.

引用本文的文献

1
Morphometry Difference of the Hippocampal Formation Between Blind and Sighted Individuals.盲人与视力正常者海马结构的形态测量差异
Front Neurosci. 2021 Nov 4;15:715749. doi: 10.3389/fnins.2021.715749. eCollection 2021.
2
Patch-based Mapping of Transentorhinal Cortex with a Distributed Atlas.基于分布式图谱的内嗅皮质局部映射
Med Image Comput Comput Assist Interv. 2018 Sep;11072:689-697. doi: 10.1007/978-3-030-00931-1_79. Epub 2018 Sep 13.
3
Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space.

本文引用的文献

1
Fiber Orientation and Compartment Parameter Estimation From Multi-Shell Diffusion Imaging.基于多壳层扩散成像的纤维取向和隔室参数估计
IEEE Trans Med Imaging. 2015 Nov;34(11):2320-32. doi: 10.1109/TMI.2015.2430850. Epub 2015 May 7.
2
Anatomy-guided Dense Individualized and Common Connectivity-based Cortical Landmarks (A-DICCCOL).解剖学引导的基于密集个体化和共同连通性的皮质地标(A-DICCCOL)
IEEE Trans Biomed Eng. 2015 Apr;62(4):1108-19. doi: 10.1109/TBME.2014.2369491. Epub 2014 Nov 20.
3
Registering cortical surfaces based on whole-brain structural connectivity and continuous connectivity analysis.
曲面的黎曼度量优化(RMOS)在拉普拉斯-贝尔特拉米嵌入空间中的内在脑图谱绘制。
Med Image Anal. 2018 May;46:189-201. doi: 10.1016/j.media.2018.03.004. Epub 2018 Mar 16.
4
Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space.拉普拉斯-贝尔特拉米嵌入空间中纹状体表面的整体映射
Med Image Comput Comput Assist Interv. 2017 Sep;10433:21-30. doi: 10.1007/978-3-319-66182-7_3. Epub 2017 Sep 4.
5
Topological false discovery rates for brain mapping based on signal height.基于信号高度的脑映射拓扑假发现率。
Neuroimage. 2018 Feb 15;167:478-487. doi: 10.1016/j.neuroimage.2016.09.045. Epub 2016 Nov 10.
基于全脑结构连通性和连续连通性分析来注册皮质表面。
Med Image Comput Comput Assist Interv. 2014;17(Pt 3):161-8. doi: 10.1007/978-3-319-10443-0_21.
4
Metric optimization for surface analysis in the Laplace-Beltrami embedding space.拉普拉斯 - 贝尔特拉米嵌入空间中用于表面分析的度量优化
IEEE Trans Med Imaging. 2014 Jul;33(7):1447-63. doi: 10.1109/TMI.2014.2313812. Epub 2014 Mar 25.
5
Diffeomorphic spectral matching of cortical surfaces.皮质表面的微分同胚谱匹配
Inf Process Med Imaging. 2013;23:376-89. doi: 10.1007/978-3-642-38868-2_32.
6
The WU-Minn Human Connectome Project: an overview.《WU-Minn 人类连接组计划:概述》。
Neuroimage. 2013 Oct 15;80:62-79. doi: 10.1016/j.neuroimage.2013.05.041. Epub 2013 May 16.
7
Mapping hippocampal and ventricular change in Alzheimer disease.绘制阿尔茨海默病中海马体和脑室的变化情况。
Neuroimage. 2004 Aug;22(4):1754-66. doi: 10.1016/j.neuroimage.2004.03.040.
8
Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging.利用扩散成像对人类丘脑与皮层之间的连接进行无创图谱绘制。
Nat Neurosci. 2003 Jul;6(7):750-7. doi: 10.1038/nn1075.
9
Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.基于皮质表面的分析。II:膨胀、扁平化及基于表面的坐标系。
Neuroimage. 1999 Feb;9(2):195-207. doi: 10.1006/nimg.1998.0396.