Liu Yang, Du Juan, Lai Qiliang, Dong Chunming, Shao Zongze
State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, State Oceanic Administration, Fujian Collaborative Innovation Center for Exploitation and Utilization of Marine Biological Resources, Fujian Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA, Xiamen 361005, PR China.
Int J Syst Evol Microbiol. 2017 May;67(5):1271-1274. doi: 10.1099/ijsem.0.001798. Epub 2017 May 30.
A bacterial strain, designated JS7-11T, was isolated from the surface sediment of the Jiulong River and characterized using a polyphasic taxonomic approach. Cells of JS7-11T were Gram-staining-negative, non-motile and short-rod-shaped. Growth was observed at 10-40 °C (optimum 25-30 °C), at pH 6-8 (optimum 7) and in 1-12 % NaCl (optimum 3-4 %, w/v). The results of phylogenetic analysis based on 16S rRNA gene sequences indicated that JS7-11T and Nioella nitratireducens SSW136T formed an independent cluster, sharing 97.9 % similarity between the two strains, and less than 96.0 % similarities with other type strains of members of the family Rhodobacteraceae. The major fatty acids were summed feature 8 and C16 : 0. The quinone was identified as Q-10. The polar lipids comprised phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and two unidentified phospholipids. The DNA G+C content was 63.4 mol%. The digital DNA-DNA hybridization and average nucleotide identity values between JS7-11T and N. nitratireducens SSW136T were 22.1 and 79.4 %, respectively. The results of phenotypic, phylogenetic and chemotaxonomic analyses clearly indicated that JS7-11T represents a novel species within the genus Nioella, for which the name Nioellasediminis sp. nov. is proposed. The type strain of the novel species is JS7-11T (=MCCC 1A00710T=KCTC 42144T).
从九龙江表层沉积物中分离出一株细菌,命名为JS7-11T,并采用多相分类方法对其进行了表征。JS7-11T细胞革兰氏染色阴性,无运动性,呈短杆状。在10-40 °C(最适温度25-30 °C)、pH 6-8(最适pH 7)和1-12 % NaCl(最适浓度3-4 %,w/v)条件下可观察到生长。基于16S rRNA基因序列的系统发育分析结果表明,JS7-11T与硝酸盐还原尼奥氏菌SSW136T形成一个独立的簇,两株菌之间的相似性为97.9 %,与红杆菌科其他模式菌株的相似性低于96.0 %。主要脂肪酸为特征性总和8和C16 : 0。醌类被鉴定为Q-10。极性脂质包括磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油和两种未鉴定的磷脂。DNA的G+C含量为63.4 mol%。JS7-11T与硝酸盐还原尼奥氏菌SSW136T之间的数字DNA-DNA杂交值和平均核苷酸同一性值分别为22.1和79.4 %。表型、系统发育和化学分类分析结果清楚地表明,JS7-11T代表尼奥氏菌属内的一个新物种,为此提出新名称Nioellasediminis sp. nov.。该新物种的模式菌株为JS7-11T(=MCCC 1A00710T=KCTC 42144T)。