School of Oceanography, Shanghai Jiao Tong University, Shanghai, 200030, People's Republic of China.
Key Laboratory of Marine Ecosystem Dynamics, Ministry of Natural Resources & Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, 310012, People's Republic of China.
Curr Microbiol. 2021 Jun;78(6):2455-2463. doi: 10.1007/s00284-021-02475-z. Epub 2021 Apr 23.
A novel Gram-negative, nonspore forming, nonmotile, and short-rod-shaped aerobic bacterium, designated DY48A3-103, was isolated from a seawater sample collected from the West Pacific Ocean. Strain DY48A3-103 showed oxidase-positive and catalase-positive activities. Growth was observed at 10-37 °C (optimum 30 °C), at pH 6.5-9.5 (optimum 8.0) and in 1-11% NaCl (optimum 3%, w/v). 16S rRNA gene sequence analysis exhibited 96.3%, 96.1%, 96.0%, and 94.9% sequence similarity to the type strains Rhodophyticola porphyridii MA-7-27, Nioella sediminis JS7-11, N. nitratireducens SSW136, and Jannaschia helgolandensis DSM 14858, respectively. Strain DY48A3-103 and the type strains of phylogenetically related species have 61.7-75.4% AAI values, which fell into to the genus boundary range (60-80% AAI). Phylogenetic trees based on the 16S rRNA gene sequences and the genome sequences of strain DY48A3-103 revealed that it was affiliated to the members of the family Rhodobacteraceae. The G+C content was 65.4%. The sole isoprenoid quinone was Q-10. The predominant polar lipids were phosphatidylcholine and phosphatidylglycerol. Major fatty acids were summed feature 8 (comprising Cω7c and/or Cω6c), C cyclo ω8c, and C. On the basis of the phenotypic, chemotaxonomic, and genomic properties, strain DY48A3-103t is proposed to represent a novel genus and a novel species, Alterinioella nitratireducens gen. nov., sp. nov., in the family Rhodobacteraceae. The type strain is DY48A3-103 (= KCTC 72738 = MCCC 1K04322).
一株新的革兰氏阴性、非孢子形成、非运动、短杆状需氧细菌,命名为 DY48A3-103,从西太平洋采集的海水样本中分离得到。DY48A3-103 菌株表现出氧化酶阳性和过氧化氢酶阳性活性。该菌株在 10-37°C(最佳 30°C)、pH6.5-9.5(最佳 8.0)和 1-11%NaCl(最佳 3%,w/v)的条件下生长。16S rRNA 基因序列分析显示,与模式菌株 Rhodophyticola porphyridii MA-7-27、Nioella sediminis JS7-11、N. nitratireducens SSW136 和 Jannaschia helgolandensis DSM 14858 的相似度分别为 96.3%、96.1%、96.0%和 94.9%。DY48A3-103 株与系统发育上相关物种的模式菌株的 AAI 值为 61.7-75.4%,属于属的界限范围(60-80% AAI)。基于 16S rRNA 基因序列和 DY48A3-103 株基因组序列构建的系统发育树表明,它属于红杆菌科的成员。该菌株的 G+C 含量为 65.4%。唯一的类异戊二烯醌为 Q-10。主要的极性脂为磷脂酰胆碱和磷脂酰甘油。主要脂肪酸为 summed feature 8(包含 Cω7c 和/或 Cω6c)、C 环 ω8c 和 C。基于表型、化学分类和基因组特性,菌株 DY48A3-103t 被提议代表红杆菌科的一个新属和一个新种,即 Alterinioella nitratireducens 属,种,nov.。该模式菌株为 DY48A3-103(=KCTC 72738=MCCC 1K04322)。