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耐硝酸盐交替单胞菌属,新属,新种,从西太平洋海水中分离得到。

Alterinioella nitratireducens gen. nov., sp. nov., Isolated from Seawater in the West Pacific Ocean.

机构信息

School of Oceanography, Shanghai Jiao Tong University, Shanghai, 200030, People's Republic of China.

Key Laboratory of Marine Ecosystem Dynamics, Ministry of Natural Resources & Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, 310012, People's Republic of China.

出版信息

Curr Microbiol. 2021 Jun;78(6):2455-2463. doi: 10.1007/s00284-021-02475-z. Epub 2021 Apr 23.

Abstract

A novel Gram-negative, nonspore forming, nonmotile, and short-rod-shaped aerobic bacterium, designated DY48A3-103, was isolated from a seawater sample collected from the West Pacific Ocean. Strain DY48A3-103 showed oxidase-positive and catalase-positive activities. Growth was observed at 10-37 °C (optimum 30 °C), at pH 6.5-9.5 (optimum 8.0) and in 1-11% NaCl (optimum 3%, w/v). 16S rRNA gene sequence analysis exhibited 96.3%, 96.1%, 96.0%, and 94.9% sequence similarity to the type strains Rhodophyticola porphyridii MA-7-27, Nioella sediminis JS7-11, N. nitratireducens SSW136, and Jannaschia helgolandensis DSM 14858, respectively. Strain DY48A3-103 and the type strains of phylogenetically related species have 61.7-75.4% AAI values, which fell into to the genus boundary range (60-80% AAI). Phylogenetic trees based on the 16S rRNA gene sequences and the genome sequences of strain DY48A3-103 revealed that it was affiliated to the members of the family Rhodobacteraceae. The G+C content was 65.4%. The sole isoprenoid quinone was Q-10. The predominant polar lipids were phosphatidylcholine and phosphatidylglycerol. Major fatty acids were summed feature 8 (comprising Cω7c and/or Cω6c), C cyclo ω8c, and C. On the basis of the phenotypic, chemotaxonomic, and genomic properties, strain DY48A3-103t is proposed to represent a novel genus and a novel species, Alterinioella nitratireducens gen. nov., sp. nov., in the family Rhodobacteraceae. The type strain is DY48A3-103 (= KCTC 72738 = MCCC 1K04322).

摘要

一株新的革兰氏阴性、非孢子形成、非运动、短杆状需氧细菌,命名为 DY48A3-103,从西太平洋采集的海水样本中分离得到。DY48A3-103 菌株表现出氧化酶阳性和过氧化氢酶阳性活性。该菌株在 10-37°C(最佳 30°C)、pH6.5-9.5(最佳 8.0)和 1-11%NaCl(最佳 3%,w/v)的条件下生长。16S rRNA 基因序列分析显示,与模式菌株 Rhodophyticola porphyridii MA-7-27、Nioella sediminis JS7-11、N. nitratireducens SSW136 和 Jannaschia helgolandensis DSM 14858 的相似度分别为 96.3%、96.1%、96.0%和 94.9%。DY48A3-103 株与系统发育上相关物种的模式菌株的 AAI 值为 61.7-75.4%,属于属的界限范围(60-80% AAI)。基于 16S rRNA 基因序列和 DY48A3-103 株基因组序列构建的系统发育树表明,它属于红杆菌科的成员。该菌株的 G+C 含量为 65.4%。唯一的类异戊二烯醌为 Q-10。主要的极性脂为磷脂酰胆碱和磷脂酰甘油。主要脂肪酸为 summed feature 8(包含 Cω7c 和/或 Cω6c)、C 环 ω8c 和 C。基于表型、化学分类和基因组特性,菌株 DY48A3-103t 被提议代表红杆菌科的一个新属和一个新种,即 Alterinioella nitratireducens 属,种,nov.。该模式菌株为 DY48A3-103(=KCTC 72738=MCCC 1K04322)。

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