Dos Santos Michelly da Silva, Kretschmer Rafael, Frankl-Vilches Carolina, Bakker Antje, Gahr Manfred, O Brien Patricia C M, Ferguson-Smith Malcolm A, de Oliveira Edivaldo H C
Programa de Pós-Graduação em Genética e Biologia Molecular, ICB, UFPA, Belém, PA, Brazil.
Programa de Pós-Graduação em Genética e Biologia Molecular, UFRGS, Porto Alegre, RS, Brazil.
PLoS One. 2017 Jan 27;12(1):e0170997. doi: 10.1371/journal.pone.0170997. eCollection 2017.
Songbird species (order Passeriformes, suborder Oscines) are important models in various experimental fields spanning behavioural genomics to neurobiology. Although the genomes of some songbird species were sequenced recently, the chromosomal organization of these species is mostly unknown. Here we focused on the two most studied songbird species in neuroscience, the zebra finch (Taeniopygia guttata) and the canary (Serinus canaria). In order to clarify these issues and also to integrate chromosome data with their assembled genomes, we used classical and molecular cytogenetics in both zebra finch and canary to define their chromosomal homology, localization of heterochromatic blocks and distribution of rDNA clusters. We confirmed the same diploid number (2n = 80) in both species, as previously reported. FISH experiments confirmed the occurrence of multiple paracentric and pericentric inversions previously found in other species of Passeriformes, providing a cytogenetic signature for this order, and corroborating data from in silico analyses. Additionally, compared to other Passeriformes, we detected differences in the zebra finch karyotype concerning the morphology of some chromosomes, in the distribution of 5S rDNA clusters, and an inversion in chromosome 1.
鸣禽物种(雀形目,鸣禽亚目)是从行为基因组学到神经生物学等各个实验领域的重要模型。尽管最近对一些鸣禽物种的基因组进行了测序,但这些物种的染色体组织大多未知。在这里,我们聚焦于神经科学中研究最多的两种鸣禽物种,斑胸草雀(Taeniopygia guttata)和金丝雀(Serinus canaria)。为了阐明这些问题,并将染色体数据与其组装好的基因组整合起来,我们在斑胸草雀和金丝雀中使用经典和分子细胞遗传学方法来确定它们的染色体同源性、异染色质块的定位以及核糖体DNA(rDNA)簇的分布。我们证实了这两个物种的二倍体数目相同(2n = 80),如先前报道的那样。荧光原位杂交(FISH)实验证实了先前在其他雀形目物种中发现的多个臂内和臂间倒位的存在,为该目提供了细胞遗传学特征,并证实了计算机分析的数据。此外,与其他雀形目相比,我们在斑胸草雀的核型中检测到一些染色体形态、5S rDNA簇分布以及1号染色体倒位方面的差异。