Slobodkina Galina B, Mardanov Andrey V, Ravin Nikolai V, Frolova Anastasia A, Chernyh Nikolay A, Bonch-Osmolovskaya Elizaveta A, Slobodkin Alexander I
Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences Moscow, Russia.
Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences Moscow, Russia.
Front Microbiol. 2017 Jan 30;8:87. doi: 10.3389/fmicb.2017.00087. eCollection 2017.
Respiratory ammonification of nitrate is the microbial process that determines the retention of nitrogen in an ecosystem. To date, sulfur-dependent dissimilatory nitrate reduction to ammonium has been demonstrated only with sulfide as an electron donor. We detected a novel pathway that couples the sulfur and nitrogen cycles. Thermophilic anaerobic bacteria and , isolated from deep-sea hydrothermal vents, grew autotrophically with elemental sulfur as an electron donor and nitrate as an electron acceptor producing sulfate and ammonium. The genomes of both bacteria contain a gene cluster that encodes a putative nitrate ammonification enzyme system. Nitrate reduction occurs via a Nap-type complex. The reduction of produced nitrite to ammonium does not proceed via the canonical Nrf system because nitrite reductase NrfA is absent in the genomes of both microorganisms. The genome of encodes a complete sulfate reduction pathway, while the Sox sulfur oxidation system is missing, as shown previously for . Thus, in high-temperature environments, nitrate ammonification with elemental sulfur may represent an unrecognized route of primary biomass production. Moreover, the anaerobic oxidation of sulfur compounds coupled to growth has not previously been demonstrated for the members of or , which were considered exclusively as participants of the reductive branch of the sulfur cycle.
硝酸盐的呼吸性氨化作用是决定生态系统中氮保留的微生物过程。迄今为止,仅以硫化物作为电子供体时,已证明了依赖硫的异化硝酸盐还原为铵的过程。我们检测到了一种将硫循环和氮循环联系起来的新途径。从深海热液喷口分离出的嗜热厌氧细菌和,以元素硫作为电子供体、硝酸盐作为电子受体进行自养生长,产生硫酸盐和铵。这两种细菌的基因组都包含一个编码假定的硝酸盐氨化酶系统的基因簇。硝酸盐还原通过Nap型复合物发生。产生的亚硝酸盐还原为铵的过程并非通过经典的Nrf系统进行,因为这两种微生物的基因组中均不存在亚硝酸盐还原酶NrfA。的基因组编码一条完整的硫酸盐还原途径,而如先前对所显示的那样,缺少Sox硫氧化系统。因此,在高温环境中,利用元素硫进行的硝酸盐氨化作用可能代表了一种未被认识的初级生物质生产途径。此外,与生长相关的硫化合物厌氧氧化此前尚未在或的成员中得到证实,它们曾被认为仅是硫循环还原分支的参与者。