Lin Hailan, Lin Xijian, Zhu Jiwei, Yu Xiao-Qiang, Xia Xiaofeng, Yao Fengluan, Yang Guang, You Minsheng
State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, and College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Institute of Applied Ecology and Research Centre for Biodiversity and Eco-Safety, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
BMC Genomics. 2017 Feb 14;18(1):162. doi: 10.1186/s12864-017-3583-z.
Serine protease inhibitors (SPIs) have been found in all living organisms and play significant roles in digestion, development and innate immunity. In this study, we present a genome-wide identification and expression profiling of SPI genes in the diamondback moth, Plutella xylostella (L.), a major pest of cruciferous crops with global distribution and broad resistance to different types of insecticides.
A total of 61 potential SPI genes were identified in the P. xylostella genome, and these SPIs were classified into serpins, canonical inhibitors, and alpha-2-macroglobulins based on their modes of action. Sequence alignments showed that amino acid residues in the hinge region of known inhibitory serpins from other insect species were conserved in most P. xylostella serpins, suggesting that these P. xylostella serpins may be functionally active. Phylogenetic analysis confirmed that P. xylostella inhibitory serpins were clustered with known inhibitory serpins from six other insect species. More interestingly, nine serpins were highly similar to the orthologues in Manduca sexta which have been demonstrated to participate in regulating the prophenoloxidase activation cascade, an important innate immune response in insects. Of the 61 P.xylostella SPI genes, 33 were canonical SPIs containing seven types of inhibitor domains, including Kunitz, Kazal, TIL, amfpi, Antistasin, WAP and Pacifastin. Moreover, some SPIs contained additional non-inhibitor domains, including spondin_N, reeler, and other modules, which may be involved in protein-protein interactions. Gene expression profiling showed gene-differential, stage- and sex-specific expression patterns of SPIs, suggesting that SPIs may be involved in multiple physiological processes in P. xylostella.
This is the most comprehensive investigation so far on SPI genes in P. xylostella. The characterized features and expression patterns of P. xylostella SPIs indicate that the SPI family genes may be involved in innate immunity of this species. Our findings provide valuable information for uncovering further biological roles of SPI genes in P. xylostella.
丝氨酸蛋白酶抑制剂(SPIs)在所有生物中都有发现,并在消化、发育和先天免疫中发挥重要作用。在本研究中,我们对小菜蛾(Plutella xylostella (L.))中的SPI基因进行了全基因组鉴定和表达谱分析。小菜蛾是十字花科作物的主要害虫,分布于全球,对不同类型的杀虫剂具有广泛抗性。
在小菜蛾基因组中总共鉴定出61个潜在的SPI基因,这些SPIs根据其作用模式被分为丝氨酸蛋白酶抑制剂(serpins)、典型抑制剂和α-2-巨球蛋白。序列比对显示,来自其他昆虫物种的已知抑制性丝氨酸蛋白酶抑制剂铰链区的氨基酸残基在大多数小菜蛾丝氨酸蛋白酶抑制剂中是保守的,这表明这些小菜蛾丝氨酸蛋白酶抑制剂可能具有功能活性。系统发育分析证实,小菜蛾抑制性丝氨酸蛋白酶抑制剂与来自其他六种昆虫物种的已知抑制性丝氨酸蛋白酶抑制剂聚集在一起。更有趣的是,九个丝氨酸蛋白酶抑制剂与烟草天蛾中的直系同源物高度相似,这些直系同源物已被证明参与调节酚氧化酶原激活级联反应,这是昆虫重要的先天免疫反应。在61个小菜蛾SPI基因中,33个是典型的SPIs,包含七种抑制剂结构域,包括Kunitz、Kazal、TIL、amfpi、抗凝血酶(Antistasin)、WAP和Pacifastin。此外,一些SPIs包含额外的非抑制剂结构域,包括spondin_N、reeler和其他模块,这些可能参与蛋白质-蛋白质相互作用。基因表达谱显示了SPIs的基因差异、阶段和性别特异性表达模式,表明SPIs可能参与小菜蛾的多种生理过程。
这是迄今为止对小菜蛾SPI基因最全面的研究。小菜蛾SPIs的特征特性和表达模式表明,SPI家族基因可能参与该物种的先天免疫。我们的研究结果为揭示SPI基因在小菜蛾中的进一步生物学作用提供了有价值的信息。