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易出错的DnaE2平衡了DK1622中的基因组突变率。

Error-prone DnaE2 Balances the Genome Mutation Rates in DK1622.

作者信息

Peng Ran, Chen Jiang-He, Feng Wan-Wan, Zhang Zheng, Yin Jun, Li Ze-Shuo, Li Yue-Zhong

机构信息

State Key Laboratory of Microbial Technology, School of Life Science, Shandong University Jinan, China.

出版信息

Front Microbiol. 2017 Feb 1;8:122. doi: 10.3389/fmicb.2017.00122. eCollection 2017.

Abstract

is an alpha subunit of the tripartite protein complex of DNA polymerase III that is responsible for the replication of bacterial genome. The gene is often duplicated in many bacteria, and the duplicated gene was reported dispensable for cell survivals and error-prone in DNA replication in a mystery. In this study, we found that all sequenced myxobacterial genomes possessed two genes. The duplicate genes were both highly conserved but evolved divergently, suggesting their importance in myxobacteria. Using DK1622 as a model, we confirmed that 1 () was essential for cell survival, while 2 () was dispensable and encoded an error-prone enzyme for replication. The deletion of 2 had small effects on cellular growth and social motility, but significantly decreased the development and sporulation abilities, which could be recovered by the complementation of 2. The expression of 1 was always greatly higher than that of 2 in either the growth or developmental stage. However, overexpression of 2 could not make 1 deletable, probably due to their protein structural and functional divergences. The 2 overexpression not only improved the growth, development and sporulation abilities, but also raised the genome mutation rate of . We argued that the low-expressed error-prone 2 played as a balancer for the genome mutation rates, ensuring low mutation rates for cell adaptation in new environments but avoiding damages from high mutation rates to cells.

摘要

是DNA聚合酶III三方蛋白质复合物的α亚基,负责细菌基因组的复制。该基因在许多细菌中常常是重复的,并且据报道重复的基因对于细胞存活是可有可无的,而且在DNA复制中容易出错,这一直是个谜。在本研究中,我们发现所有已测序的粘细菌基因组都有两个该基因。这两个重复的基因都高度保守但进化 divergent,表明它们在粘细菌中很重要。以DK1622为模型,我们证实1()对细胞存活至关重要,而2()是可有可无的,并且编码一种易出错的复制酶。删除2对细胞生长和群体运动影响较小,但显著降低了发育和产孢能力,这可以通过补充2来恢复。在生长或发育阶段,1的表达总是大大高于2。然而,过表达2并不能使1可被删除,可能是由于它们的蛋白质结构和功能差异。2的过表达不仅提高了生长、发育和产孢能力,还提高了基因组的突变率。我们认为低表达的易出错的2起到了基因组突变率平衡器的作用,确保在新环境中细胞适应时有低突变率,同时避免高突变率对细胞造成损害。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1475/5285347/b56db2557c67/fmicb-08-00122-g0001.jpg

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