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MLST-based inference of genetic diversity and population structure of clinical Klebsiella pneumoniae, China.基于多位点序列分型的中国临床肺炎克雷伯菌遗传多样性和种群结构推断
Sci Rep. 2015 Jan 5;5:7612. doi: 10.1038/srep07612.
2
Klebsiella: a long way to go towards understanding this enigmatic jet-setter.克雷伯氏菌:距离了解这种神秘的“旅行常客”还有很长的路要走。
F1000Prime Rep. 2014 Aug 1;6:64. doi: 10.12703/P6-64. eCollection 2014.
3
MgrB inactivation is a common mechanism of colistin resistance in KPC-producing Klebsiella pneumoniae of clinical origin.MgrB失活是临床分离的产KPC肺炎克雷伯菌对黏菌素耐药的常见机制。
Antimicrob Agents Chemother. 2014 Oct;58(10):5696-703. doi: 10.1128/AAC.03110-14. Epub 2014 Jul 14.
4
Prokka: rapid prokaryotic genome annotation.Prokka:快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
5
blaNDM-1-carrying Acinetobacter johnsonii detected in hospital sewage.在医院污水中检测到携带 blaNDM-1 的鲍曼不动杆菌。
J Antimicrob Chemother. 2013 May;68(5):1007-10. doi: 10.1093/jac/dks505. Epub 2013 Jan 3.
6
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
7
Rapid detection and identification of metallo-beta-lactamase-encoding genes by multiplex real-time PCR assay and melt curve analysis.通过多重实时聚合酶链反应检测和熔解曲线分析快速检测和鉴定金属β-内酰胺酶编码基因。
J Clin Microbiol. 2007 Feb;45(2):544-7. doi: 10.1128/JCM.01728-06. Epub 2006 Nov 8.
8
Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates.肺炎克雷伯菌医院分离株的多位点序列分型
J Clin Microbiol. 2005 Aug;43(8):4178-82. doi: 10.1128/JCM.43.8.4178-4182.2005.
9
Emergence of carbapenem-resistant Klebsiella species possessing the class A carbapenem-hydrolyzing KPC-2 and inhibitor-resistant TEM-30 beta-lactamases in New York City.纽约市出现携带A类碳青霉烯水解酶KPC - 2和抑制剂耐药性TEM - 30β-内酰胺酶的耐碳青霉烯克雷伯菌属细菌。
Clin Infect Dis. 2004 Jul 1;39(1):55-60. doi: 10.1086/421495. Epub 2004 Jun 14.
10
Biochemical sequence analyses of GES-1, a novel class A extended-spectrum beta-lactamase, and the class 1 integron In52 from Klebsiella pneumoniae.肺炎克雷伯菌中新型A类超广谱β-内酰胺酶GES-1及1类整合子In52的生化序列分析
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携带碳青霉烯酶基因的耐黏菌素临床菌株的基因组序列草图

Draft Genome Sequence of a Colistin-Resistant Clinical Strain Carrying the Carbapenemase Gene.

作者信息

Yao Zhihong, Feng Yu, Lin Ji, Zong Zhiyong

机构信息

Center of Infectious Diseases, West China Hospital, Sichuan University, Chengdu, China.

Faculty of Pharmacology and Medical Technology, Hanzhong Vocational and Technical College, Hanzhong, Shaanxi, China.

出版信息

Genome Announc. 2017 Feb 16;5(7):e01654-16. doi: 10.1128/genomeA.01654-16.

DOI:10.1128/genomeA.01654-16
PMID:28209835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5313627/
Abstract

strain WCHKP1845, recovered from the sputum of a patient with pneumonia, was resistant to colistin and carried the carbapenemase gene Here, we report its 5.4-Mb draft genome sequence, comprising 140 contigs with an average 57.33% G+C content. The genome contains 5,118 coding sequences and 88 tRNA genes.

摘要

从一名肺炎患者痰液中分离出的菌株WCHKP1845对黏菌素耐药,并携带碳青霉烯酶基因。在此,我们报告其5.4 Mb的草图基因组序列,由140个重叠群组成,平均G+C含量为57.33%。该基因组包含5118个编码序列和88个tRNA基因。