Yao Wenjing, Zhang Xuemei, Zhou Boru, Zhao Kai, Li Renhua, Jiang Tingbo
State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry UniversityHarbin, China; Northeast Institute of Geography and Agroecology, Chinese Academy of SciencesHarbin, China.
State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University Harbin, China.
Front Plant Sci. 2017 Feb 20;8:181. doi: 10.3389/fpls.2017.00181. eCollection 2017.
Identification of gene expression patterns of key genes across multiple abiotic stresses is critical for mechanistic understanding of stress resistance in plant. In the present study, we identified differentially expressed genes (DEGs) in di-haploid under respective stresses of NaCl, KCl, CdCl and PEG. On the basis of RNA-Seq, we detected 247 DEGs that are shared by the four stresses in wild type poplar, and mRNA abundance of the DEGs were validated in transgenic poplar overexpressing gene by RNA-Seq and RT-qPCR. Results from gene ontology analysis indicated that these genes are enriched in significant pathways, such as phenylpropanoid biosynthesis, phenylalanine metabolism, starch and sucrose metabolism, and plant hormone signal transduction. Ethylene response factor (ERF) gene family plays significant role in plant abiotic stress responses. We also investigated expression pattern of ERF gene family under the four stresses. The ERFs and DEGs share similar expression pattern across the four stresses. The transgenic poplar is superior to WT in morphologic, physiological and biochemical traits, which demonstrated the gene plays a significant role in stress resistance. These studies will give a rise in understanding the stress response mechanisms in poplar.
鉴定关键基因在多种非生物胁迫下的基因表达模式对于从机制上理解植物的抗逆性至关重要。在本研究中,我们鉴定了双单倍体在NaCl、KCl、CdCl和PEG各自胁迫下的差异表达基因(DEG)。基于RNA测序,我们在野生型杨树中检测到247个在四种胁迫下共有的DEG,并且通过RNA测序和RT-qPCR在过表达该基因的转基因杨树中验证了这些DEG的mRNA丰度。基因本体分析结果表明,这些基因在重要途径中富集,如苯丙烷类生物合成、苯丙氨酸代谢、淀粉和蔗糖代谢以及植物激素信号转导。乙烯响应因子(ERF)基因家族在植物非生物胁迫响应中起重要作用。我们还研究了ERF基因家族在四种胁迫下的表达模式。ERF和DEG在四种胁迫下具有相似的表达模式。转基因杨树在形态、生理和生化特性方面优于野生型,这表明该基因在抗逆性中起重要作用。这些研究将有助于增进对杨树胁迫响应机制的理解。