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葡萄座腔菌属的系统发育物种识别与杂交:以猴面包树相关物种为例的研究

Phylogenetic species recognition and hybridisation in Lasiodiplodia: A case study on species from baobabs.

作者信息

Cruywagen Elsie M, Slippers Bernard, Roux Jolanda, Wingfield Michael J

机构信息

Department of Plant and Soil Sciences, DST-NRF Centre of Excellence in Tree Health Biotechnology (CTHB), Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Pretoria 0083, South Africa.

Department of Genetics, CTHB, FABI, University of Pretoria, Pretoria 0083, South Africa.

出版信息

Fungal Biol. 2017 Apr;121(4):420-436. doi: 10.1016/j.funbio.2016.07.014. Epub 2016 Aug 3.

Abstract

Lasiodiplodia species (Botryosphaeriaceae, Ascomycota) infect a wide range of typically woody plants on which they are associated with many different disease symptoms. In this study, we determined the identity of Lasiodiplodia isolates obtained from baobab (Adansonia species) trees in Africa and reviewed the molecular markers used to describe Lasiodiplodia species. Publicly available and newly produced sequence data for some of the type strains of Lasiodiplodia species showed incongruence amongst phylogenies of five nuclear loci. We conclude that several of the previously described Lasiodiplodia species are hybrids of other species. Isolates from baobab trees in Africa included nine species of Lasiodiplodia and two hybrid species. Inoculation trials with the most common Lasiodiplodia species collected from these trees produced significant lesions on young baobab trees. There was also variation in aggressiveness amongst isolates from the same species. The apparently widespread tendency of Lasiodiplodia species to hybridise demands that phylogenies from multiple loci (more than two and preferably four or more) are compared for congruence prior to new species being described. This will avoid hybrids being incorrectly described as new taxa, as has clearly occurred in the past.

摘要

壳梭孢属真菌(葡萄座腔菌科,子囊菌门)可感染多种典型的木本植物,并在这些植物上引发多种不同的病害症状。在本研究中,我们确定了从非洲猴面包树(猴面包树属物种)上分离得到的壳梭孢属菌株的身份,并回顾了用于描述壳梭孢属物种的分子标记。壳梭孢属部分模式菌株的公开可用及新生成的序列数据显示,五个核基因座的系统发育之间存在不一致。我们得出结论,一些先前描述的壳梭孢属物种是其他物种的杂交种。从非洲猴面包树上分离得到的菌株包括九种壳梭孢属真菌和两种杂交种。用从这些树上采集到的最常见的壳梭孢属物种进行接种试验,在幼龄猴面包树上产生了明显的病斑。同一物种的分离株在致病力上也存在差异。壳梭孢属物种明显普遍的杂交倾向要求在描述新物种之前,比较多个基因座(超过两个,最好是四个或更多)的系统发育以确保一致性。这将避免杂交种被错误地描述为新分类群,而这在过去显然已经发生过。

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