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新型酵母琥珀抑制基因tRNATrpA的构建、表达及功能

Construction, expression, and function of a new yeast amber suppressor, tRNATrpA.

作者信息

Kim D, Johnson J

机构信息

Department of Molecular Biology, University of Wyoming, Laramie 82071.

出版信息

J Biol Chem. 1988 May 25;263(15):7316-21.

PMID:2835371
Abstract

The number of different tRNA species in Saccharomyces cerevisiae known to be capable of suppressing termination of translation at UAG, UAA, and UGA codons is limited to those which insert tyrosine, leucine, and serine. Suppressor tRNAs that insert other amino acids, even those whose anticodons differ from the expected recognition sequences for nonsense codons by a single nucleotide, have never been identified via classical genetic analysis. We have used site-directed mutagenesis to convert the anticodon of a cloned tRNATrp gene from CCA to CTA with the expectation that this gene would produce tRNA molecules capable of interacting with the UAG terminator codon. We show that this form of the gene can be transcribed and spliced in vitro to produce mature tRNA with the expected base sequence. The putative suppressor gene has been introduced into several S. cerevisiae host strains using the centromere vector YCp19. Efficient suppression of amber mutations met8-1, tyr7-1, and lys2-801 results from the presence of the CTA form of tDNATrp. Two UAA mutants, leu2-1 and ade2-101, and the UGA marker his4-260 are not suppressed.

摘要

已知能够抑制酿酒酵母中UAG、UAA和UGA密码子处翻译终止的不同tRNA种类仅限于那些插入酪氨酸、亮氨酸和丝氨酸的tRNA。即使那些反密码子与无义密码子的预期识别序列仅相差一个核苷酸的插入其他氨基酸的抑制性tRNA,也从未通过经典遗传分析鉴定出来。我们利用定点诱变将克隆的tRNATrp基因的反密码子从CCA转换为CTA,期望该基因能产生能够与UAG终止密码子相互作用的tRNA分子。我们表明这种形式的基因可以在体外转录和剪接,以产生具有预期碱基序列的成熟tRNA。使用着丝粒载体YCp19已将推定的抑制基因导入几种酿酒酵母宿主菌株。tDNATrp的CTA形式的存在导致对琥珀突变met8-1、tyr7-1和lys2-801的有效抑制。两个UAA突变体leu2-1和ade2-101以及UGA标记his4-260未被抑制。

相似文献

1
Construction, expression, and function of a new yeast amber suppressor, tRNATrpA.新型酵母琥珀抑制基因tRNATrpA的构建、表达及功能
J Biol Chem. 1988 May 25;263(15):7316-21.
2
Yeast tRNATrp genes with anticodons corresponding to UAA and UGA nonsense codons.带有与UAA和UGA无义密码子相对应反密码子的酵母色氨酸转运RNA基因。
Nucleic Acids Res. 1990 Jul 25;18(14):4215-21. doi: 10.1093/nar/18.14.4215.
3
In vivo modulation of yeast tRNA gene expression by 5'-flanking sequences.5'-侧翼序列对酵母tRNA基因表达的体内调控
EMBO J. 1985 Oct;4(10):2649-56. doi: 10.1002/j.1460-2075.1985.tb03983.x.
4
Mutants of Escherichia coli initiator tRNA that suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts.大肠杆菌起始tRNA的突变体,其可抑制酿酒酵母中的琥珀密码子,并被酵母提取物用酪氨酸进行氨酰化。
Proc Natl Acad Sci U S A. 1991 Dec 15;88(24):11378-82. doi: 10.1073/pnas.88.24.11378.
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Defined set of cloned termination suppressors: in vivo activity of isogenetic UAG, UAA, and UGA suppressor tRNAs.克隆终止抑制因子的特定集合:同基因UAG、UAA和UGA抑制性tRNA的体内活性
J Bacteriol. 1984 Jun;158(3):849-59. doi: 10.1128/jb.158.3.849-859.1984.
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Mutations in the anticodon stem affect removal of introns from pre-tRNA in Saccharomyces cerevisiae.反密码子茎中的突变影响酿酒酵母前体tRNA中内含子的去除。
Mol Cell Biol. 1989 Oct;9(10):4220-8. doi: 10.1128/mcb.9.10.4220-4228.1989.
7
Physiological levels of normal tRNA(CAGGln) can effect partial suppression of amber mutations in the yeast Saccharomyces cerevisiae.正常tRNA(CAGGln)的生理水平可部分抑制酿酒酵母中的琥珀突变。
Proc Natl Acad Sci U S A. 1987 Nov;84(22):8031-4. doi: 10.1073/pnas.84.22.8031.
8
Splicing of a yeast proline tRNA containing a novel suppressor mutation in the anticodon stem.一种在反密码子茎中含有新型抑制突变的酵母脯氨酸tRNA的剪接。
J Mol Biol. 1986 Nov 5;192(1):49-63. doi: 10.1016/0022-2836(86)90463-8.
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The Schizosaccharomyces pombe sup3-i suppressor recognizes ochre, but not amber codons in vitro and in vivo.粟酒裂殖酵母sup3-i抑制基因在体外和体内可识别赭石密码子,但不能识别琥珀密码子。
EMBO J. 1984 Feb;3(2):423-8. doi: 10.1002/j.1460-2075.1984.tb01823.x.
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Functional differences among the six Saccharomyces cerevisiae tRNATrp genes.酿酒酵母六个色氨酸转运RNA基因之间的功能差异。
Yeast. 1997 Nov;13(14):1357-62. doi: 10.1002/(SICI)1097-0061(199711)13:14<1357::AID-YEA180>3.0.CO;2-3.

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A connection between the ribosome and two S. pombe tRNA modification mutants subject to rapid tRNA decay.核糖体与两个 S. pombe tRNA 修饰突变体之间的联系,这些突变体易发生 tRNA 快速衰变。
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The requirement for the highly conserved G-1 residue of Saccharomyces cerevisiae tRNAHis can be circumvented by overexpression of tRNAHis and its synthetase.
高度保守的酿酒酵母 tRNAHis 的 G-1 残基要求可以通过过量表达 tRNAHis 和其合成酶来规避。
RNA. 2010 May;16(5):1068-77. doi: 10.1261/rna.2087510. Epub 2010 Apr 1.
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Transfer RNA-mediated suppression of stop codons in protoplasts and transgenic plants.原生质体和转基因植物中转运RNA介导的终止密码子抑制作用
Plant Mol Biol. 1993 Jul;22(4):681-90. doi: 10.1007/BF00047408.
5
Anticodon bases C34 and C35 are major, positive, identity elements in Saccharomyces cerevisiae tRNA(Trp).反密码子的第34位和第35位碱基是酿酒酵母色氨酸转运RNA(tRNA(Trp))中的主要正向识别元件。
Nucleic Acids Res. 1993 Nov 11;21(22):5079-84. doi: 10.1093/nar/21.22.5079.
6
Construction of an opal suppressor by oligonucleotide-directed mutagenesis of a Saccharomyces cerevisiae tRNA(Trp) gene.通过对酿酒酵母tRNA(Trp)基因进行寡核苷酸定向诱变构建乳白抑制基因。
Mol Cell Biol. 1990 Aug;10(8):4379-83. doi: 10.1128/mcb.10.8.4379-4383.1990.
7
Yeast tRNATrp genes with anticodons corresponding to UAA and UGA nonsense codons.带有与UAA和UGA无义密码子相对应反密码子的酵母色氨酸转运RNA基因。
Nucleic Acids Res. 1990 Jul 25;18(14):4215-21. doi: 10.1093/nar/18.14.4215.
8
Compilation of tRNA sequences and sequences of tRNA genes.tRNA序列及tRNA基因序列的汇编。
Nucleic Acids Res. 1991 Apr 25;19 Suppl(Suppl):2127-71. doi: 10.1093/nar/19.suppl.2127.
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Plant nonsense suppressor tRNA(Tyr) genes are expressed at very low levels in vitro due to inefficient splicing of the intron-containing pre-tRNAs.植物无义抑制tRNA(Tyr)基因在体外表达水平极低,原因是含内含子的前体tRNA剪接效率低下。
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A bacterial amber suppressor in Saccharomyces cerevisiae is selectively recognized by a bacterial aminoacyl-tRNA synthetase.酿酒酵母中的一种细菌琥珀抑制子被一种细菌氨酰-tRNA合成酶选择性识别。
Mol Cell Biol. 1990 Apr;10(4):1633-41. doi: 10.1128/mcb.10.4.1633-1641.1990.