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来自嗜冷细菌海栖嗜冷单胞菌的依赖烟酰胺腺嘌呤二核苷酸磷酸的异柠檬酸脱氢酶。

NADP-dependent isocitrate dehydrogenase from a psychrophilic bacterium, Psychromonas marina.

作者信息

Hirota Ryo, Tsubouchi Kango, Takada Yasuhiro

机构信息

Biosystems Science Course, Graduate School of Life Science, Hokkaido University, Kita 10-jo Nishi 8-chome, Kita-ku, Sapporo, 060-0810, Japan.

Department of Biological Sciences, Faculty of Science, Hokkaido University, Kita 10-jo Nishi 8-chome, Kita-ku, Sapporo, 060-0810, Japan.

出版信息

Extremophiles. 2017 Jul;21(4):711-721. doi: 10.1007/s00792-017-0936-0. Epub 2017 Apr 26.

Abstract

The gene encoding NADP-dependent isocitrate dehydrogenase (IDH; EC 1.1.1.42) of a psychrophilic bacterium, Psychromonas marina, was cloned and sequenced. The open reading frame of the gene encoding IDH of P. marina (PmIDH) was 2229 bp in length and corresponded to a polypeptide composed of 742 amino acids. The molecular mass of IDH was calculated as 80,426 Da. The deduced amino acid sequence of PmIDH exhibited high degrees of homology with the monomeric IDH from other bacteria such as Colwellia maris (62% identity) and Azotobacter vinelandii (AvIDH) (64%). His-tagged PmIDH overexpressed in Escherichia coli cells was purified and characterized. The optimum temperature of PmIDH activity was about 35 °C; however, the enzyme lost 74% of the activity after incubation for 10 min at 30 °C, indicating that this enzyme is thermolabile. Chimeric enzymes produced through domain swapping between PmIDH and mesophilic AvIDH were constructed and their optimum temperatures and thermostability were determined. The results suggest that regions 2 and 3, especially region 3, of the two IDHs are involved in their catalytic activities and optimum temperature and thermostability for activity.

摘要

对嗜冷细菌海生嗜冷单胞菌(Psychromonas marina)中编码烟酰胺腺嘌呤二核苷酸磷酸(NADP)依赖型异柠檬酸脱氢酶(IDH;EC 1.1.1.42)的基因进行了克隆和测序。海生嗜冷单胞菌IDH(PmIDH)编码基因的开放阅读框长度为2229 bp,对应于一个由742个氨基酸组成的多肽。IDH的分子量计算为80,426 Da。推导的PmIDH氨基酸序列与来自其他细菌(如海洋冷杆菌(Colwellia maris),同一性为62%)和棕色固氮菌(Azotobacter vinelandii,AvIDH)(同一性为64%)的单体IDH具有高度同源性。在大肠杆菌细胞中过表达的带有His标签的PmIDH被纯化并进行了特性分析。PmIDH活性的最适温度约为35°C;然而,该酶在30°C孵育10分钟后失去了74%的活性,表明这种酶不耐热。构建了通过PmIDH和嗜温的AvIDH之间的结构域交换产生的嵌合酶,并测定了它们的最适温度和热稳定性。结果表明,两种IDH的区域2和区域3,特别是区域3,参与了它们的催化活性以及活性的最适温度和热稳定性。

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