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对东帝汶黄瓜样本的RNA测序链特异性文库分析揭示了一个完整基因组。

Analysis of an RNA-seq Strand-Specific Library from an East Timorese Cucumber Sample Reveals a Complete Genome.

作者信息

Maina Solomon, Edwards Owain R, de Almeida Luis, Ximenes Abel, Jones Roger A C

机构信息

School of Agriculture and Environment, Faculty of Science, University of Western Australia, Crawley, Western Australia, Australia.

Institute of Agriculture, Faculty of Science, University of Western Australia, Crawley, Western Australia, Australia.

出版信息

Genome Announc. 2017 May 11;5(19):e00320-17. doi: 10.1128/genomeA.00320-17.

DOI:10.1128/genomeA.00320-17
PMID:28495776
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5427211/
Abstract

Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembled the genome of the South Korean isolate HD118.

摘要

对从核酸快速分析技术(FTA)卡提取的黄瓜叶RNA构建的RNA测序文库进行分析,揭示了来自东帝汶的首个完整的黄瓜脉黄病毒(CABYV)基因组。我们将其与来自世界其他地区的35个完整的CABYV基因组进行了比较。它与韩国分离株HD118的基因组最为相似。

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Papaya ringspot virus Populations From East Timorese and Northern Australian Cucurbit Crops: Biological and Molecular Properties, and Absence of Genetic Connectivity.来自东帝汶和澳大利亚北部葫芦科作物的木瓜环斑病毒种群:生物学和分子特性,以及缺乏遗传连通性
Plant Dis. 2017 Jun;101(6):985-993. doi: 10.1094/PDIS-10-16-1499-RE. Epub 2017 Apr 4.
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Genome Announc. 2017 Jan 12;5(2):e01445-16. doi: 10.1128/genomeA.01445-16.
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