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用于快速筛选酵母对香豆酸产量的细菌生物传感器的开发。

Development of a Bacterial Biosensor for Rapid Screening of Yeast p-Coumaric Acid Production.

作者信息

Siedler Solvej, Khatri Narendar K, Zsohár Andrea, Kjærbølling Inge, Vogt Michael, Hammar Petter, Nielsen Christian F, Marienhagen Jan, Sommer Morten O A, Joensson Haakan N

机构信息

Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark , Kogle Alle 6, Hørsholm, 2970, Denmark.

Division of Proteomics and Nanobiotechnology, Science for Life Laboratory, KTH Royal Institute of Technology , Stockholm, 114 28, Sweden.

出版信息

ACS Synth Biol. 2017 Oct 20;6(10):1860-1869. doi: 10.1021/acssynbio.7b00009. Epub 2017 Jun 21.

Abstract

Transcription factor-based biosensors are used to identify producer strains, a critical bottleneck in cell factory engineering. Here, we address two challenges with this methodology: transplantation of heterologous transcriptional regulators into new hosts to generate functional biosensors and biosensing of the extracellular product concentration that accurately reflects the effective cell factory production capacity. We describe the effects of different translation initiation rates on the dynamic range of a p-coumaric acid biosensor based on the Bacillus subtilis transcriptional repressor PadR by varying its ribosomal binding site. Furthermore, we demonstrate the functionality of this p-coumaric acid biosensor in Escherichia coli and Corynebacterium glutamicum. Finally, we encapsulate yeast p-coumaric acid-producing cells with E. coli-biosensing cells in picoliter droplets and, in a microfluidic device, rapidly sort droplets containing yeast cells producing high amounts of extracellular p-coumaric acid using the fluorescent E. coli biosensor signal. As additional biosensors become available, such approaches will find broad applications for screening of an extracellular product.

摘要

基于转录因子的生物传感器用于识别生产菌株,这是细胞工厂工程中的一个关键瓶颈。在此,我们用这种方法解决两个挑战:将异源转录调节因子移植到新宿主中以生成功能性生物传感器,以及对能准确反映有效细胞工厂生产能力的细胞外产物浓度进行生物传感。我们通过改变其核糖体结合位点,描述了不同翻译起始速率对基于枯草芽孢杆菌转录阻遏物PadR的对香豆酸生物传感器动态范围的影响。此外,我们证明了这种对香豆酸生物传感器在大肠杆菌和谷氨酸棒杆菌中的功能。最后,我们将酵母对香豆酸生产细胞与大肠杆菌生物传感细胞封装在皮升液滴中,并在微流控装置中,利用荧光大肠杆菌生物传感器信号快速分选含有产生大量细胞外对香豆酸的酵母细胞的液滴。随着更多生物传感器的出现,此类方法将在细胞外产物筛选中得到广泛应用。

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