• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

连续的范围扩张促进了空间结构化微生物种群的多样性并加速了其进化。

Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations.

作者信息

Goldschmidt Felix, Regoes Roland R, Johnson David R

机构信息

Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland.

Department of Environmental Microbiology, Eawag, Dübendorf, Switzerland.

出版信息

ISME J. 2017 Sep;11(9):2112-2123. doi: 10.1038/ismej.2017.76. Epub 2017 May 23.

DOI:10.1038/ismej.2017.76
PMID:28534878
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5563963/
Abstract

Successive range expansions occur within all domains of life, where one population expands first (primary expansion) and one or more secondary populations then follow (secondary expansion). In general, genetic drift reduces diversity during range expansion. However, it is not clear whether the same effect applies during successive range expansion, mainly because the secondary population must expand into space occupied by the primary population. Here we used an experimental microbial model system to show that, in contrast to primary range expansion, successive range expansion promotes local population diversity. Because of mechanical constraints imposed by the presence of the primary population, the secondary population forms fractal-like dendritic structures. This divides the advancing secondary population into many small sub-populations and promotes intermixing between the primary and secondary populations. We further developed a mathematical model to simulate the formation of dendritic structures in the secondary population during succession. By introducing mutations in the primary or dendritic secondary populations, we found that mutations are more likely to accumulate in the dendritic secondary populations. Our results thus show that successive range expansion can promote intermixing over the short term and increase genetic diversity over the long term. Our results therefore have potentially important implications for predicting the ecological processes and evolutionary trajectories of microbial communities.

摘要

连续的范围扩张发生在生命的所有领域,其中一个种群首先扩张(初级扩张),然后一个或多个次级种群随后跟进(次级扩张)。一般来说,遗传漂变会在范围扩张期间降低多样性。然而,尚不清楚在连续的范围扩张期间是否会产生同样的影响,主要是因为次级种群必须扩张到初级种群占据的空间中。在这里,我们使用了一个实验性微生物模型系统来表明,与初级范围扩张相反,连续的范围扩张促进了局部种群的多样性。由于初级种群的存在所施加的机械限制,次级种群形成了分形状的树枝状结构。这将前进的次级种群分成许多小的亚种群,并促进了初级和次级种群之间的混合。我们进一步开发了一个数学模型来模拟连续过程中次级种群中树枝状结构的形成。通过在初级或树枝状次级种群中引入突变,我们发现突变更有可能在树枝状次级种群中积累。因此,我们的结果表明,连续的范围扩张可以在短期内促进混合,并在长期内增加遗传多样性。因此,我们的结果对于预测微生物群落的生态过程和进化轨迹具有潜在的重要意义。

相似文献

1
Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations.连续的范围扩张促进了空间结构化微生物种群的多样性并加速了其进化。
ISME J. 2017 Sep;11(9):2112-2123. doi: 10.1038/ismej.2017.76. Epub 2017 May 23.
2
Mitochondrial DNA diversity in the Llanos de Moxos: Moxo, Movima and Yuracare Amerindian populations from Bolivia lowlands.莫霍斯平原的线粒体DNA多样性:来自玻利维亚低地的莫霍、莫维马和尤拉卡雷美洲印第安人群体
Ann Hum Biol. 2004 Jan-Feb;31(1):9-28. doi: 10.1080/03014460310001616464.
3
Genetic mixture of multiple source populations accelerates invasive range expansion.多个源种群的基因混合加速了入侵范围的扩大。
J Anim Ecol. 2017 Jan;86(1):21-34. doi: 10.1111/1365-2656.12567. Epub 2016 Aug 8.
4
Expansion Under Climate Change: The Genetic Consequences.气候变化下的扩张:遗传后果
Bull Math Biol. 2016 Nov;78(11):2165-2185. doi: 10.1007/s11538-016-0213-x. Epub 2016 Oct 14.
5
Expansion load: recessive mutations and the role of standing genetic variation.扩展负荷:隐性突变与现存遗传变异的作用
Mol Ecol. 2015 May;24(9):2084-94. doi: 10.1111/mec.13154.
6
On the accumulation of deleterious mutations during range expansions.在范围扩张过程中有害突变的积累。
Mol Ecol. 2013 Dec;22(24):5972-82. doi: 10.1111/mec.12524. Epub 2013 Nov 4.
7
How Obstacles Perturb Population Fronts and Alter Their Genetic Structure.障碍如何扰乱种群前沿并改变其遗传结构
PLoS Comput Biol. 2015 Dec 22;11(12):e1004615. doi: 10.1371/journal.pcbi.1004615. eCollection 2015 Dec.
8
Intra-deme molecular diversity in spatially expanding populations.空间扩张种群中的deme内分子多样性。
Mol Biol Evol. 2003 Jan;20(1):76-86. doi: 10.1093/molbev/msg009.
9
Evolution of drift robustness in small populations.小种群中漂变稳健性的进化。
Nat Commun. 2017 Oct 18;8(1):1012. doi: 10.1038/s41467-017-01003-7.
10
Cooperation mitigates diversity loss in a spatially expanding microbial population.合作缓解了空间扩展微生物种群中的多样性损失。
Proc Natl Acad Sci U S A. 2019 Nov 19;116(47):23582-23587. doi: 10.1073/pnas.1910075116. Epub 2019 Oct 7.

引用本文的文献

1
Disentangling the feedback loops driving spatial patterning in microbial communities.解析驱动微生物群落空间模式形成的反馈回路。
NPJ Biofilms Microbiomes. 2025 Feb 20;11(1):32. doi: 10.1038/s41522-025-00666-1.
2
Inferring bacterial interspecific interactions from microcolony growth expansion.从微菌落生长扩展推断细菌种间相互作用。
Microlife. 2024 Oct 4;5:uqae020. doi: 10.1093/femsml/uqae020. eCollection 2024.
3
Higher-order interactions and emergent properties of microbial communities: The power of synthetic ecology.微生物群落的高阶相互作用和涌现特性:合成生态学的力量。
Heliyon. 2024 Jul 9;10(14):e33896. doi: 10.1016/j.heliyon.2024.e33896. eCollection 2024 Jul 30.
4
Phage predation accelerates the spread of plasmid-encoded antibiotic resistance.噬菌体捕食加速了质粒编码抗生素耐药性的传播。
Nat Commun. 2024 Jun 26;15(1):5397. doi: 10.1038/s41467-024-49840-7.
5
Substrate availability and toxicity shape the structure of microbial communities engaged in metabolic division of labor.底物可用性和毒性塑造了参与代谢分工的微生物群落结构。
mLife. 2022 Jun 30;1(2):131-145. doi: 10.1002/mlf2.12025. eCollection 2022 Jun.
6
Denitrification in low oxic environments increases the accumulation of nitrogen oxide intermediates and modulates the evolutionary potential of microbial populations.在低氧环境中进行的反硝化作用会增加氮氧化物中间体的积累,并调节微生物种群的进化潜力。
Environ Microbiol Rep. 2024 Feb;16(1):e13221. doi: 10.1111/1758-2229.13221. Epub 2023 Nov 30.
7
From microbiome composition to functional engineering, one step at a time.从微生物组组成到功能工程,一步一个脚印。
Microbiol Mol Biol Rev. 2023 Dec 20;87(4):e0006323. doi: 10.1128/mmbr.00063-23. Epub 2023 Nov 10.
8
Initial community composition determines the long-term dynamics of a microbial cross-feeding interaction by modulating niche availability.初始群落组成通过调节生态位可用性来决定微生物互养相互作用的长期动态。
ISME Commun. 2022 Aug 24;2(1):77. doi: 10.1038/s43705-022-00160-1.
9
Multiscale spatial segregation analysis in digital images of biofilms.生物膜数字图像中的多尺度空间分离分析
Biofilm. 2023 Sep 20;6:100157. doi: 10.1016/j.bioflm.2023.100157. eCollection 2023 Dec 15.
10
Evaporation-induced hydrodynamics control plasmid transfer during surface-associated microbial growth.在表面相关微生物生长过程中,蒸发诱导的流体动力学控制质粒转移。
NPJ Biofilms Microbiomes. 2023 Aug 22;9(1):58. doi: 10.1038/s41522-023-00428-x.

本文引用的文献

1
Metabolite toxicity determines the pace of molecular evolution within microbial populations.代谢物毒性决定了微生物种群内分子进化的速度。
BMC Evol Biol. 2017 Feb 14;17(1):52. doi: 10.1186/s12862-017-0906-2.
2
Segregating metabolic processes into different microbial cells accelerates the consumption of inhibitory substrates.将代谢过程分隔到不同的微生物细胞中可加速抑制性底物的消耗。
ISME J. 2016 Jul;10(7):1568-78. doi: 10.1038/ismej.2015.243. Epub 2016 Jan 15.
3
Resource limitation drives spatial organization in microbial groups.资源限制驱动微生物群体的空间组织。
ISME J. 2016 Jun;10(6):1471-82. doi: 10.1038/ismej.2015.208. Epub 2015 Nov 27.
4
Migration and horizontal gene transfer divide microbial genomes into multiple niches.迁移和水平基因转移将微生物基因组划分为多个生态位。
Nat Commun. 2015 Nov 23;6:8924. doi: 10.1038/ncomms9924.
5
Cell polarity-driven instability generates self-organized, fractal patterning of cell layers.细胞极性驱动的不稳定性产生细胞层的自组织分形图案。
ACS Synth Biol. 2013 Dec 20;2(12):705-14. doi: 10.1021/sb400030p. Epub 2013 Jun 3.
6
Strong inter-population cooperation leads to partner intermixing in microbial communities.强大的种群间合作导致微生物群落中伙伴的混合。
Elife. 2013 Jan 22;2:e00230. doi: 10.7554/eLife.00230.
7
Reconstructing Native American population history.重建美洲原住民人口历史。
Nature. 2012 Aug 16;488(7411):370-4. doi: 10.1038/nature11258.
8
Streaming instability in growing cell populations.细胞群体生长中的流动不稳定性。
Phys Rev Lett. 2010 May 21;104(20):208101. doi: 10.1103/PhysRevLett.104.208101. Epub 2010 May 19.
9
Changes through time: integrating microorganisms into the study of succession.时间变迁:将微生物纳入演替研究中。
Res Microbiol. 2010 Oct;161(8):635-42. doi: 10.1016/j.resmic.2010.06.002. Epub 2010 Jun 22.
10
Oral multispecies biofilm development and the key role of cell-cell distance.口腔多物种生物膜的形成与细胞-细胞间距的关键作用
Nat Rev Microbiol. 2010 Jul;8(7):471-80. doi: 10.1038/nrmicro2381.