• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用碲中心的安德森-埃文斯多钨酸盐在蛋白质晶体学中的十大优势。

Ten Good Reasons for the Use of the Tellurium-Centered Anderson-Evans Polyoxotungstate in Protein Crystallography.

机构信息

University of Vienna , Faculty of Chemistry, Department of Biophysical Chemistry, Althanstraße 14, 1090 Vienna, Austria.

出版信息

Acc Chem Res. 2017 Jun 20;50(6):1441-1448. doi: 10.1021/acs.accounts.7b00109. Epub 2017 May 31.

DOI:10.1021/acs.accounts.7b00109
PMID:28562014
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5480232/
Abstract

Protein crystallography represents at present the most productive and most widely used method to obtain structural information on target proteins and protein-ligand complexes within the atomic resolution range. The knowledge obtained in this way is essential for understanding the biology, chemistry, and biochemistry of proteins and their functions but also for the development of compounds of high pharmacological and medicinal interest. Here, we address the very central problem in protein crystallography: the unpredictability of the crystallization process. Obtaining protein crystals that diffract to high resolutions represents the essential step to perform any structural study by X-ray crystallography; however, this method still depends basically on trial and error making it a very time- and resource-consuming process. The use of additives is an established process to enable or improve the crystallization of proteins in order to obtain high quality crystals. Therefore, a more universal additive addressing a wider range of proteins is desirable as it would represent a huge advance in protein crystallography and at the same time drastically impact multiple research fields. This in turn could add an overall benefit for the entire society as it profits from the faster development of novel or improved drugs and from a deeper understanding of biological, biochemical, and pharmacological phenomena. With this aim in view, we have tested several compounds belonging to the emerging class of polyoxometalates (POMs) for their suitability as crystallization additives and revealed that the tellurium-centered Anderson-Evans polyoxotungstate [TeWO] (TEW) was the most suitable POM-archetype. After its first successful application as a crystallization additive, we repeatedly reported on TEW's positive effects on the crystallization behavior of proteins with a particular focus on the protein-TEW interactions. As electrostatic interactions are the main force for TEW binding to proteins, TEW with its highly negative charge addresses in principle all proteins possessing positively charged patches. Furthermore, due to its high structural and chemical diversity, TEW exhibits major advantages over some commonly used crystallization additives. Therefore, we summarized all features of TEW, which are beneficial for protein crystallization, and present ten good reasons to promote the use of TEW in protein crystallography as a powerful additive. Our results demonstrate that TEW is a compound that is, in many respects, predestined as a crystallization additive. We assume that many crystallographers and especially researchers, who are not experts in this field but willing to crystallize their structurally unknown target protein, could benefit from the use of TEW as it is able to promote both the crystallization process itself and the subsequent structure elucidation by providing valuable anomalous signals, which are helpful for the phasing step.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/9a511e3275a3/ar-2017-00109r_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/14ee4e9954bc/ar-2017-00109r_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/c29d7c5333f6/ar-2017-00109r_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/9ba0e5316fe9/ar-2017-00109r_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/8ded6c7c8575/ar-2017-00109r_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/c31276941313/ar-2017-00109r_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/9a511e3275a3/ar-2017-00109r_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/14ee4e9954bc/ar-2017-00109r_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/c29d7c5333f6/ar-2017-00109r_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/9ba0e5316fe9/ar-2017-00109r_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/8ded6c7c8575/ar-2017-00109r_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/c31276941313/ar-2017-00109r_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f26b/5480232/9a511e3275a3/ar-2017-00109r_0006.jpg
摘要

蛋白质晶体学目前是获取目标蛋白质和蛋白质-配体复合物原子分辨率结构信息的最具成效和应用最广泛的方法。通过这种方式获得的知识对于理解蛋白质及其功能的生物学、化学和生物化学至关重要,也有助于开发具有高药理和医学价值的化合物。在这里,我们解决了蛋白质晶体学中非常核心的问题:结晶过程的不可预测性。获得能够高分辨率衍射的蛋白质晶体是通过 X 射线晶体学进行任何结构研究的基本步骤;然而,该方法仍然基本上依赖于反复试验,使其成为一个非常耗时和耗资源的过程。添加剂的使用是一种已建立的方法,可使蛋白质结晶或改善蛋白质结晶,以获得高质量的晶体。因此,需要一种更通用的添加剂来解决更广泛的蛋白质问题,因为这将是蛋白质晶体学的巨大进步,同时也会极大地影响多个研究领域。这反过来又会为整个社会带来整体效益,因为它可以从新型或改进药物的快速发展以及对生物学、生物化学和药理学现象的更深入理解中受益。有鉴于此,我们测试了几种属于新兴多金属氧酸盐(POM)类别的化合物,以评估它们作为结晶添加剂的适用性,并发现碲中心的安德森-埃文斯多钨酸盐 [TeWO](TEW)是最适合的 POM 原型。在首次成功应用作为结晶添加剂后,我们多次报道了 TEW 对蛋白质结晶行为的积极影响,特别关注蛋白质-TEW 相互作用。由于静电相互作用是 TEW 与蛋白质结合的主要力,因此具有高度负电荷的 TEW 原则上可以与所有带有正电荷的蛋白质结合。此外,由于其结构和化学多样性高,TEW 比一些常用的结晶添加剂具有更大的优势。因此,我们总结了 TEW 对蛋白质结晶有益的所有特性,并提出了十个充分的理由来促进 TEW 在蛋白质晶体学中作为一种强大的添加剂的使用。我们的研究结果表明,TEW 是一种在许多方面都非常适合作为结晶添加剂的化合物。我们假设许多晶体学家,尤其是那些不是该领域专家但愿意结晶其结构未知的靶蛋白的研究人员,可以从 TEW 的使用中受益,因为它不仅能够促进结晶过程本身,还能够通过提供有价值的异常信号来促进后续的结构阐明,这有助于相分析步骤。

相似文献

1
Ten Good Reasons for the Use of the Tellurium-Centered Anderson-Evans Polyoxotungstate in Protein Crystallography.使用碲中心的安德森-埃文斯多钨酸盐在蛋白质晶体学中的十大优势。
Acc Chem Res. 2017 Jun 20;50(6):1441-1448. doi: 10.1021/acs.accounts.7b00109. Epub 2017 May 31.
2
Polyoxometalates: more than a phasing tool in protein crystallography.多金属氧酸盐:蛋白质晶体学中不仅仅是一种相位测定工具。
ChemTexts. 2018;4(3):10. doi: 10.1007/s40828-018-0064-1. Epub 2018 Aug 28.
3
Hen egg-white lysozyme crystallisation: protein stacking and structure stability enhanced by a Tellurium(VI)-centred polyoxotungstate.鸡蛋清溶菌酶结晶:以碲(VI)为中心的多金属氧酸盐增强蛋白质堆积和结构稳定性
Chembiochem. 2015 Jan 19;16(2):233-41. doi: 10.1002/cbic.201402597. Epub 2014 Dec 17.
4
In situ formation of the first proteinogenically functionalized [TeWOO(Glu)] structure reveals unprecedented chemical and geometrical features of the Anderson-type cluster.首例蛋白质原官能化的[TeWOO(Glu)]结构的原位形成揭示了安德森型簇前所未有的化学和几何特征。
Chem Commun (Camb). 2016 Oct 11;52(83):12286-12289. doi: 10.1039/c6cc07004c.
5
The crystallization additive hexatungstotellurate promotes the crystallization of the HSP70 nucleotide binding domain into two different crystal forms.结晶添加剂六钨碲酸盐促进 HSP70 核苷酸结合域形成两种不同的晶体形式。
PLoS One. 2018 Jun 27;13(6):e0199639. doi: 10.1371/journal.pone.0199639. eCollection 2018.
6
The potential of hexatungstotellurate(VI) to induce a significant entropic gain during protein crystallization.六钨碲酸盐(VI)在蛋白质结晶过程中诱导显著熵增的潜力。
IUCrJ. 2017 Oct 27;4(Pt 6):734-740. doi: 10.1107/S2052252517012349. eCollection 2017 Nov 1.
7
Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.具有匹配对称性的对称设计蛋白和多金属氧酸盐的杂化组装体。
Chem Commun (Camb). 2020 Oct 1;56(78):11601-11604. doi: 10.1039/d0cc05071g.
8
Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).大分子拥挤现象:化学与物理邂逅生物学(瑞士阿斯科纳,2012年6月10日至14日)
Phys Biol. 2013 Aug;10(4):040301. doi: 10.1088/1478-3975/10/4/040301. Epub 2013 Aug 2.
9
Exploiting Interactions between Polyoxometalates and Proteins for Applications in (Bio)chemistry and Medicine.利用多金属氧酸盐与蛋白质的相互作用在(生物)化学和医学中的应用
Angew Chem Int Ed Engl. 2023 Aug 1;62(31):e202303817. doi: 10.1002/anie.202303817. Epub 2023 May 15.
10
Interactions between polyoxometalates and biological systems: from drug design to artificial enzymes.多酸化合物与生物体系的相互作用:从药物设计到人工酶。
Curr Opin Biotechnol. 2019 Aug;58:92-99. doi: 10.1016/j.copbio.2018.11.013. Epub 2018 Dec 6.

引用本文的文献

1
Unravelling 100-Year-Old Mystery of Rosenheim's Transition-Metal Paramolybdate Complexes.解开百年之谜:罗森海姆过渡金属钼酸盐配合物
Inorg Chem. 2025 Jul 21;64(28):14209-14219. doi: 10.1021/acs.inorgchem.5c01133. Epub 2025 Jul 7.
2
Tyrosinases: a family of copper-containing metalloenzymes.酪氨酸酶:一类含铜金属酶。
ChemTexts. 2024;10(4):12. doi: 10.1007/s40828-024-00195-y. Epub 2024 Nov 30.
3
All-Inorganic Polyoxometalates Act as Superchaotropic Membrane Carriers.全无机多金属氧酸盐作为超离液膜载体。

本文引用的文献

1
Cytotoxicity and enzyme inhibition studies of polyoxometalates and their chitosan nanoassemblies.多金属氧酸盐及其壳聚糖纳米组装体的细胞毒性和酶抑制研究。
Toxicol Rep. 2014 Jun 6;1:341-352. doi: 10.1016/j.toxrep.2014.06.001. eCollection 2014.
2
Heterologous expression and characterization of functional mushroom tyrosinase (AbPPO4).功能性蘑菇酪氨酸酶(AbPPO4)的异源表达与特性分析。
Sci Rep. 2017 May 12;7(1):1810. doi: 10.1038/s41598-017-01813-1.
3
In situ formation of the first proteinogenically functionalized [TeWOO(Glu)] structure reveals unprecedented chemical and geometrical features of the Anderson-type cluster.
Adv Mater. 2024 Jan;36(1):e2309219. doi: 10.1002/adma.202309219. Epub 2023 Nov 27.
4
Speciation atlas of polyoxometalates in aqueous solutions.多金属氧酸盐在水溶液中的形态图集。
Sci Adv. 2023 Jun 23;9(25):eadi0814. doi: 10.1126/sciadv.adi0814. Epub 2023 Jun 21.
5
Adaptive Responses of a Peroxidase-like Polyoxometalate-Based Tri-Assembly to Bacterial Microenvironment (BME) Significantly Improved the Anti-Bacterial Effects.基于过氧化物酶样多金属氧酸盐的三聚体对细菌微环境(BME)的自适应反应显著提高了其抗菌效果。
Int J Mol Sci. 2023 May 16;24(10):8858. doi: 10.3390/ijms24108858.
6
Design, Synthesis, Biological Evaluation, and Crystallographic Study of Novel Purine Nucleoside Phosphorylase Inhibitors.新型嘌呤核苷磷酸化酶抑制剂的设计、合成、生物评价及晶体学研究。
J Med Chem. 2023 May 25;66(10):6652-6681. doi: 10.1021/acs.jmedchem.2c02097. Epub 2023 May 3.
7
Exploring the Reactivity of Polyoxometalates toward Proteins: From Interactions to Mechanistic Insights.探索多金属氧酸盐对蛋白质的反应活性:从相互作用到机理洞察。
JACS Au. 2023 Feb 13;3(4):978-990. doi: 10.1021/jacsau.3c00011. eCollection 2023 Apr 24.
8
Enhancing Protein Crystal Nucleation Using In Situ Templating on Bioconjugate-Functionalized Nanoparticles and Machine Learning.利用生物缀合功能化纳米粒子原位模板化和机器学习增强蛋白质晶体成核。
ACS Appl Mater Interfaces. 2023 Mar 15;15(10):12622-12630. doi: 10.1021/acsami.2c17208. Epub 2023 Feb 28.
9
Oxo-Replaced Polyoxometalates: There Is More than Oxygen.氧取代的多金属氧酸盐:不止有氧气。
ACS Org Inorg Au. 2022 Dec 7;2(6):477-495. doi: 10.1021/acsorginorgau.2c00014. Epub 2022 Sep 20.
10
Tellurium-Modified Nucleosides, Nucleotides, and Nucleic Acids with Potential Applications.碲化修饰的核苷、核苷酸和核酸及其潜在应用。
Molecules. 2022 Dec 1;27(23):8379. doi: 10.3390/molecules27238379.
首例蛋白质原官能化的[TeWOO(Glu)]结构的原位形成揭示了安德森型簇前所未有的化学和几何特征。
Chem Commun (Camb). 2016 Oct 11;52(83):12286-12289. doi: 10.1039/c6cc07004c.
4
[Ni(OH)3W6O18(OCH2)3CCH2OH](4-): the first tris-functionalized Anderson-type heteropolytungstate.[Ni(OH)3W6O18(OCH2)3CCH2OH](4-): 首例三官能化安德森型杂多钨酸盐。
Chem Commun (Camb). 2016 Jul 28;52(59):9263-6. doi: 10.1039/c6cc04326g. Epub 2016 Jun 29.
5
Aurone synthase is a catechol oxidase with hydroxylase activity and provides insights into the mechanism of plant polyphenol oxidases.橙酮合酶是一种具有羟化酶活性的儿茶酚氧化酶,为植物多酚氧化酶的作用机制提供了见解。
Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1806-15. doi: 10.1073/pnas.1523575113. Epub 2016 Mar 14.
6
The Synthesis and Characterization of Aromatic Hybrid Anderson-Evans POMs and their Serum Albumin Interactions: The Shift from Polar to Hydrophobic Interactions.芳香族杂化安德森-埃文斯多金属氧酸盐的合成、表征及其与血清白蛋白的相互作用:从极性相互作用到疏水相互作用的转变
Chemistry. 2015 Dec 1;21(49):17800-7. doi: 10.1002/chem.201502458. Epub 2015 Nov 3.
7
The use of polyoxometalates in protein crystallography - An attempt to widen a well-known bottleneck.多金属氧酸盐在蛋白质晶体学中的应用——拓宽一个众所周知瓶颈的尝试。
Coord Chem Rev. 2015 Sep 1;299:22-38. doi: 10.1016/j.ccr.2015.03.018.
8
Crystallization and preliminary crystallographic analysis of latent, active and recombinantly expressed aurone synthase, a polyphenol oxidase, from Coreopsis grandiflora.大花金鸡菊中潜在的、活性的和重组表达的橙酮合酶(一种多酚氧化酶)的结晶及初步晶体学分析
Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):746-51. doi: 10.1107/S2053230X15007542. Epub 2015 May 22.
9
Site-directed mutagenesis around the CuA site of a polyphenol oxidase from Coreopsis grandiflora (cgAUS1).大花金鸡菊多酚氧化酶(cgAUS1)铜A位点周围的定点诱变
FEBS Lett. 2015 Mar 24;589(7):789-97. doi: 10.1016/j.febslet.2015.02.009. Epub 2015 Feb 16.
10
Latent and active aurone synthase from petals of C. grandiflora: a polyphenol oxidase with unique characteristics.大花金鸡菊花瓣中的潜伏型和活性橙酮合酶:一种具有独特特性的多酚氧化酶。
Planta. 2015 Sep;242(3):519-37. doi: 10.1007/s00425-015-2261-0. Epub 2015 Feb 20.