Sergueev Kirill V, Filippov Andrey A, Nikolich Mikeljon P
Department of Bacteriophage Therapeutics, Bacterial Diseases Branch, Walter Reed Army Institute of Research, Silver Spring, MD 20910, USA.
Viruses. 2017 Jun 10;9(6):144. doi: 10.3390/v9060144.
For decades, bacteriophages (phages) have been used for species identification in the diagnosis and epidemiology of brucellosis. Traditional phage typing is a multi-day procedure including the isolation of a pure culture, a step that can take up to three weeks. In this study, we focused on the use of brucellaphages for sensitive detection of the pathogen in clinical and other complex samples, and developed an indirect method of detection using real-time quantitative PCR monitoring of brucellaphage DNA amplification via replication on live cells. This assay allowed the detection of single bacteria (down to 1 colony-forming unit per milliliter) within 72 h without DNA extraction and purification steps. The technique was equally efficient with pure culture and with mixed cultures of . and α-proteobacterial near neighbors that can be misidentified as spp., and . The addition of a simple short sample preparation step enabled the indirect phage-based detection of . in spiked blood, with the same high sensitivity. This indirect phage-based detection assay enables the rapid and sensitive detection of live . in mixed cultures and in blood samples, and can potentially be applied for detection in other clinical samples and other complex sample types.
几十年来,噬菌体一直被用于布鲁氏菌病诊断和流行病学中的菌种鉴定。传统的噬菌体分型是一个需要数天的过程,包括分离纯培养物,这一步骤可能需要长达三周的时间。在本研究中,我们专注于利用布鲁氏菌噬菌体对临床及其他复杂样本中的病原体进行灵敏检测,并开发了一种间接检测方法,即通过实时定量PCR监测布鲁氏菌噬菌体在活细胞上复制时的DNA扩增情况。该检测方法能够在72小时内检测到单个细菌(低至每毫升1个菌落形成单位),且无需进行DNA提取和纯化步骤。该技术对于纯培养物以及可能被误鉴定为布鲁氏菌属的 与α-变形菌近邻的混合培养物同样有效。增加一个简单的简短样本制备步骤后,能够以同样高的灵敏度对加标血液中的布鲁氏菌进行基于噬菌体的间接检测。这种基于噬菌体的间接检测方法能够对混合培养物和血液样本中的活布鲁氏菌进行快速灵敏的检测,并有可能应用于其他临床样本和其他复杂样本类型的检测。