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Statistical performance of image cytometry for DNA, lipids, cytokeratin, & CD45 in a model system for circulation tumor cell detection.在循环肿瘤细胞检测的模型系统中,图像细胞术对DNA、脂质、细胞角蛋白和CD45的统计性能。
Cytometry A. 2017 Jul;91(7):662-674. doi: 10.1002/cyto.a.23144. Epub 2017 Jun 13.
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本文引用的文献

1
Comparison and optimization of machine learning methods for automated classification of circulating tumor cells.用于循环肿瘤细胞自动分类的机器学习方法的比较与优化
Cytometry A. 2016 Oct;89(10):922-931. doi: 10.1002/cyto.a.22993. Epub 2016 Oct 18.
2
Computational prediction of manually gated rare cells in flow cytometry data.流式细胞术数据中手动门控稀有细胞的计算预测
Cytometry A. 2015 Jul;87(7):594-602. doi: 10.1002/cyto.a.22654. Epub 2015 Mar 9.
3
Raman and coherent anti-Stokes Raman scattering microscopy studies of changes in lipid content and composition in hormone-treated breast and prostate cancer cells.拉曼光谱和相干反斯托克斯拉曼散射显微镜对激素处理的乳腺癌和前列腺癌细胞中脂质含量及成分变化的研究。
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Automated detection of circulating tumor cells with naive Bayesian classifiers.使用朴素贝叶斯分类器自动检测循环肿瘤细胞。
Cytometry A. 2014 Jun;85(6):501-11. doi: 10.1002/cyto.a.22471. Epub 2014 Apr 14.
5
Circulating Tumor Cells Count and Morphological Features in Breast, Colorectal and Prostate Cancer.乳腺癌、结直肠癌和前列腺癌中的循环肿瘤细胞计数及形态学特征
PLoS One. 2013 Jun 27;8(6):e67148. doi: 10.1371/journal.pone.0067148. Print 2013.
6
Detection of lipid-rich prostate circulating tumour cells with coherent anti-Stokes Raman scattering microscopy.利用相干反斯托克斯拉曼散射显微镜检测富含脂质的前列腺循环肿瘤细胞。
BMC Cancer. 2012 Nov 21;12:540. doi: 10.1186/1471-2407-12-540.
7
Fluid biopsy in patients with metastatic prostate, pancreatic and breast cancers.液体活检在转移性前列腺癌、胰腺癌和乳腺癌患者中的应用。
Phys Biol. 2012 Feb;9(1):016003. doi: 10.1088/1478-3975/9/1/016003. Epub 2012 Feb 3.
8
Automated identification of circulating tumor cells by image cytometry.利用图像细胞计量术自动识别循环肿瘤细胞。
Cytometry A. 2012 Feb;81(2):138-48. doi: 10.1002/cyto.a.22002. Epub 2011 Dec 13.
9
Using PCA and LVQ neural network for automatic recognition of five types of white blood cells.使用主成分分析和学习向量量化神经网络自动识别五类白细胞。
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10
Cytomorphology of circulating colorectal tumor cells:a small case series.循环结直肠肿瘤细胞的细胞形态学:一个小病例系列。
J Oncol. 2010;2010:861341. doi: 10.1155/2010/861341. Epub 2010 Jan 6.

在循环肿瘤细胞检测的模型系统中,图像细胞术对DNA、脂质、细胞角蛋白和CD45的统计性能。

Statistical performance of image cytometry for DNA, lipids, cytokeratin, & CD45 in a model system for circulation tumor cell detection.

作者信息

Futia Gregory L, Schlaepfer Isabel R, Qamar Lubna, Behbakht Kian, Gibson Emily A

机构信息

Department of Bioengineering, University of Colorado Denver | Anschutz Medical Campus, 12700 E. 19th Ave, Aurora, Colorado, 80045.

Division of Medical Oncology, University of Colorado | Anschutz Medical Campus, 12801 E. 17th Ave, Aurora, Colorado, 80045.

出版信息

Cytometry A. 2017 Jul;91(7):662-674. doi: 10.1002/cyto.a.23144. Epub 2017 Jun 13.

DOI:10.1002/cyto.a.23144
PMID:28608985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5703074/
Abstract

Detection of circulating tumor cells (CTCs) in a blood sample is limited by the sensitivity and specificity of the biomarker panel used to identify CTCs over other blood cells. In this work, we present Bayesian theory that shows how test sensitivity and specificity set the rarity of cell that a test can detect. We perform our calculation of sensitivity and specificity on our image cytometry biomarker panel by testing on pure disease positive (D ) populations (MCF7 cells) and pure disease negative populations (D ) (leukocytes). In this system, we performed multi-channel confocal fluorescence microscopy to image biomarkers of DNA, lipids, CD45, and Cytokeratin. Using custom software, we segmented our confocal images into regions of interest consisting of individual cells and computed the image metrics of total signal, second spatial moment, spatial frequency second moment, and the product of the spatial-spatial frequency moments. We present our analysis of these 16 features. The best performing of the 16 features produced an average separation of three standard deviations between D and D and an average detectable rarity of ∼1 in 200. We performed multivariable regression and feature selection to combine multiple features for increased performance and showed an average separation of seven standard deviations between the D and D populations making our average detectable rarity of ∼1 in 480. Histograms and receiver operating characteristics (ROC) curves for these features and regressions are presented. We conclude that simple regression analysis holds promise to further improve the separation of rare cells in cytometry applications. © 2017 International Society for Advancement of Cytometry.

摘要

血液样本中循环肿瘤细胞(CTC)的检测受到用于识别CTC而非其他血细胞的生物标志物组的敏感性和特异性的限制。在这项工作中,我们提出了贝叶斯理论,该理论展示了检测敏感性和特异性如何决定检测所能发现的细胞的稀有程度。我们通过对纯疾病阳性(D)群体(MCF7细胞)和纯疾病阴性群体(D)(白细胞)进行测试,来计算我们图像细胞术生物标志物组的敏感性和特异性。在这个系统中,我们进行了多通道共聚焦荧光显微镜检查,以对DNA、脂质、CD45和细胞角蛋白的生物标志物进行成像。使用定制软件,我们将共聚焦图像分割成由单个细胞组成的感兴趣区域,并计算了总信号、二阶空间矩、空间频率二阶矩以及空间 - 空间频率矩的乘积等图像指标。我们展示了对这16个特征的分析。这16个特征中表现最佳的特征在D和D之间产生了平均三个标准差的分离,平均可检测稀有度约为1/200。我们进行了多变量回归和特征选择,以组合多个特征来提高性能,结果显示D和D群体之间平均有七个标准差的分离,使我们的平均可检测稀有度约为1/480。还给出了这些特征和回归的直方图以及受试者工作特征(ROC)曲线。我们得出结论,简单的回归分析有望在细胞术应用中进一步改善稀有细胞的分离。© 2017国际细胞计量学促进协会