Ghosh Ajit
Department of Biochemistry and Molecular Biology, Shahjalal University of Science and TechnologySylhet, Bangladesh.
Front Plant Sci. 2017 Jun 1;8:836. doi: 10.3389/fpls.2017.00836. eCollection 2017.
Glyoxalase is an evolutionary highly conserved pathway present in all organisms. Conventional glyoxalase pathway has two enzymes, glyoxalase I (GLYI) and glyoxalase II (GLYII) that act sequentially to detoxify a highly cytotoxic compound methylglyoxal (MG) to D-lactate with the help of reduced glutathione. Recently, proteins with DJ-1/PfpI domain have been reported to perform the same conversion in a single step without the help of any cofactor and thus termed as "unique glyoxalase III" enzyme. Genome-wide analysis of glyoxalase genes have been previously conducted in , rice and Soybean plants, but no such study was performed for one of the agricultural important model legume species, . A comprehensive genome-wide analysis of identified a total of putative 29 GLYI, 14 GLYII genes, and 5 glyoxalase III (DJ-1) genes. All these identified genes and their corresponding proteins were analyzed in detail including their chromosomal distribution, gene duplication, phylogenetic relationship, and the presence of conserved domain(s). Expression of all these genes was analyzed in different tissues as well as under two devastating abiotic stresses- salinity and drought using publicly available transcript data. This study revealed that -4, -6, and A are the constitutive members with a high level of expression at all 17 analyzed tissues; while -1, -11, -5, 7, and 13 showed tissue-specific expression. Moreover, most of the genes displayed similar pattern of expression in response to both salinity and drought stress, irrespective of stress duration and tissue type. -8, -11, -6, -16, -21, and 9 showed up-regulation, while -17 and -7/9 showed down-regulation in response to both stresses. Interestingly, -14/15 showed completely opposite pattern of expression in these two stresses. This study provides an initial basis about the physiological significance of glyoxalase genes in plant development and stress response of that could be explored further.
乙二醛酶是一种在所有生物体中进化上高度保守的途径。传统的乙二醛酶途径有两种酶,即乙二醛酶I(GLYI)和乙二醛酶II(GLYII),它们借助还原型谷胱甘肽依次作用,将一种高细胞毒性化合物甲基乙二醛(MG)解毒为D-乳酸。最近,据报道具有DJ-1/PfpI结构域的蛋白质能够在无任何辅助因子的情况下一步完成相同的转化,因此被称为“独特的乙二醛酶III”。此前已在水稻和大豆植物中对乙二醛酶基因进行了全基因组分析,但尚未对一种重要的农业豆科模式植物进行此类研究。对[植物名称未给出]的全基因组进行综合分析,共鉴定出29个推定的GLYI基因、14个GLYII基因和5个乙二醛酶III(DJ-1)基因。对所有这些鉴定出的基因及其相应蛋白质进行了详细分析,包括它们的染色体分布、基因复制、系统发育关系以及保守结构域的存在情况。利用公开的转录数据,分析了所有这些基因在不同组织以及两种严重非生物胁迫——盐胁迫和干旱胁迫下的表达情况。这项研究表明,[基因名称未给出]-4、-6和A是组成型成员,在所有17个分析组织中均有高水平表达;而[基因名称未给出]-1、-11、-5、7和13表现出组织特异性表达。此外,无论胁迫持续时间和组织类型如何,大多数基因在盐胁迫和干旱胁迫下均表现出相似的表达模式。[基因名称未给出]-8、-11、-6、-16、-21和9表现出上调,而[基因名称未给出]-17和-7/9在两种胁迫下均表现出下调。有趣的是,[基因名称未给出]-14/15在这两种胁迫下表现出完全相反的表达模式。这项研究为乙二醛酶基因在[植物名称未给出]植物发育和胁迫响应中的生理意义提供了初步依据,可进一步深入研究。