Suppr超能文献

黄瓜( L.)非生物胁迫下乙醛酸酶基因家族的全基因组分析和表达谱分析。

Genome-Wide Analysis and Expression Profiling of Glyoxalase Gene Families Under Abiotic Stresses in Cucumber ( L.).

机构信息

College of Ecological Technology and Engineering, Shanghai Institute of Technology, Shanghai 201418, China.

Shanghai Key Laboratory of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai 201403, China.

出版信息

Int J Mol Sci. 2024 Oct 20;25(20):11294. doi: 10.3390/ijms252011294.

Abstract

The glyoxalase pathway, consisting of glyoxalase I (GLYI) and glyoxalase II (GLYII), is an enzymatic system that converts cytotoxic methylglyoxal to non-toxic S-D-lactoylglutathione. Although the gene family has been analyzed in , rice, grape, cabbage, and soybean, cucumber studies are lacking. Here, we analyzed the cucumber gene family, identifying 13 and 2 genes. Furthermore, we investigated the physicochemical properties, phylogenetic relationships, chromosomal localization and colinearity, gene structure, conserved motifs, -regulatory elements, and protein-protein interaction networks of the CsGLY family. They were primarily localized in the cytoplasm, chloroplasts, and mitochondria, with a minor presence in the nucleus. The classification of and genes into five classes closely resembled the homologous genes in and soybean. Additionally, hormone-responsive elements dominated the promoter region of genes, alongside light- and stress-responsive elements. The predicted interaction proteins of CsGLYIs and CsGLYIIs exerted a significant role in cellular respiration, amino acid synthesis, and metabolism, as well as methylglyoxal catabolism. In addition, the expression profiles of genes were distinct in different tissues of cucumber as well as under diverse abiotic stresses. This study is conducive to the further exploration of the functional diversity among glyoxalase genes and the mechanisms of stress responses in cucumber.

摘要

糖氧还蛋白途径由糖氧还酶 I (GLYI) 和糖氧还酶 II (GLYII) 组成,是一个酶系统,可将细胞毒性的甲基乙二醛转化为非毒性的 S-D-乳酰谷胱甘肽。虽然该基因家族已在拟南芥、水稻、葡萄、甘蓝和大豆中进行了分析,但黄瓜的研究尚缺乏。在这里,我们分析了黄瓜的基因家族,鉴定出 13 个和 2 个基因。此外,我们研究了 CsGLY 家族的理化性质、系统发育关系、染色体定位和共线性、基因结构、保守基序、-调控元件以及蛋白质-蛋白质相互作用网络。它们主要定位于细胞质、叶绿体和线粒体,少量存在于细胞核中。和基因的分类分为五类,与拟南芥和大豆的同源基因非常相似。此外,激素响应元件主导着基因启动子区域,同时还有光和应激响应元件。CsGLYIs 和 CsGLYIIs 的预测互作蛋白在细胞呼吸、氨基酸合成和代谢以及甲基乙二醛代谢中发挥重要作用。此外,基因的表达谱在黄瓜的不同组织以及不同非生物胁迫下存在明显差异。本研究有助于进一步探索糖氧还酶基因的功能多样性以及黄瓜应对胁迫的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d466/11508195/a28264d372bd/ijms-25-11294-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验