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一种新的神经尖峰对齐方法:质心滤波器。

A New Method for Neural Spike Alignment: The Centroid Filter.

出版信息

IEEE Trans Neural Syst Rehabil Eng. 2017 Nov;25(11):1988-1997. doi: 10.1109/TNSRE.2017.2716822. Epub 2017 Jun 16.

DOI:10.1109/TNSRE.2017.2716822
PMID:28641265
Abstract

Recordings made directly from the nervous system are a key tool in experimental electrophysiology and the development of bioelectronic medicines. Analysis of these recordings involves the identification of signals from individual neurons, a process known as spike sorting. A critical and limiting feature of spike sorting is the need to align individual spikes in time. However, electrophysiological recordings are made in extremely noisy environments that seriously limit the performance of the spike-alignment process. We present a new centroid-based method and demonstrate its effectiveness using deterministic models of nerve signals. We show that spike alignment in the presence of noise is possible with a 30 dB reduction in minimum SNR compared with the conventional methods. We present a mathematical analysis of the centroid method, characterizing its fundamental operation and performance. Furthermore, we show that the centroid method lends itself particularly well to hardware realization, and we present results from a low-power implementation that operates on an FPGA, consuming ten times less power than conventional techniques - an important property for implanted devices. Our centroid method enables the accurate alignment of spikes in sub-0 dB SNR recordings and has the potential to enable the analysis of spikes in a wider range of environments than has been previously possible. Our method thus has the potential to influence significantly the design of electrophysiological recording systems in the future.

摘要

直接从神经系统中记录的信号是实验电生理学和生物电子医学发展的关键工具。这些记录的分析涉及到从单个神经元中识别信号,这个过程被称为尖峰分类(spike sorting)。尖峰分类的一个关键和限制特征是需要在时间上对齐单个尖峰。然而,电生理记录是在极其嘈杂的环境中进行的,这严重限制了尖峰对齐过程的性能。我们提出了一种新的基于质心的方法,并使用神经信号的确定性模型证明了其有效性。我们表明,与传统方法相比,在噪声存在的情况下,通过将最小 SNR 降低 30dB 就可以实现尖峰对齐。我们对质心方法进行了数学分析,描述了其基本操作和性能。此外,我们表明质心方法特别适合硬件实现,并且我们展示了在 FPGA 上运行的低功耗实现的结果,其功耗比传统技术低十倍——这对于植入设备来说是一个重要的特性。我们的质心方法能够在低于 0dB SNR 的记录中准确对齐尖峰,并且有可能能够在比以前更广泛的环境中分析尖峰。因此,我们的方法有可能在未来对电生理记录系统的设计产生重大影响。

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A New Method for Neural Spike Alignment: The Centroid Filter.一种新的神经尖峰对齐方法:质心滤波器。
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